HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:66.0 nTPM
HPA Brain:81.7 nTPM
GTEx:66.0 nTPM
FANTOM5:76.6 Scaled Tags Per Million
Pig:87.4 nTPM
Mouse:53.9 nTPM
Allen mouse:6.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB070425
Glial cells Not detected
Neuronal cells Low


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 81.7
Sample id Sample description nTPM
Hippocampus
nTPM: 74.6
1911 Female, age 85, right hemisphere 78.0
1855 Male, age 76, left hemisphere 75.1
2621 Female, age 67, right hemisphere 75.0
2529 Female, age 94, left hemisphere 74.1
1898 Male, age 80, left hemisphere 73.5
2148 Female, age 91, left hemisphere 71.5
Dentate gyrus
nTPM: 74.8
2530 Female, age 94, left hemisphere 96.1
2010 Male, age 76, both hemispheres 82.0
2528 Male, age 74, both hemispheres 74.4
2246 Female, age 85, both hemispheres 70.4
1927 Female, age 91, both hemispheres 63.1
2531 Female, age 67, both hemispheres 63.1
Entorhinal gyrus
nTPM: 75.0
2117 Female, age 91, right hemisphere 102.5
2764 Male, age 80, right hemisphere 84.9
2613 Female, age 94, left hemisphere 75.6
1938 Female, age 85, left hemisphere 63.5
2686 Male, age 75, right hemisphere 63.4
1787 Male, age 76, left hemisphere 60.2
Hippocampus, CA1
nTPM: 70.9
2749 Male, age 80, left hemisphere 78.1
1873 Female, age 85, both hemispheres 76.2
2527 Male, age 74, both hemispheres 72.3
2082 Female, age 91, right hemisphere 70.4
2045 Male, age 76, both hemispheres 57.4
Hippocampus, CA2
nTPM: 73.4
1963 Male, age 80, left hemisphere 99.5
2249 Male, age 74, both hemispheres 74.8
2437 Female, age 94, left hemisphere 71.5
2113 Female, age 91, right hemisphere 69.1
1940 Female, age 85, left hemisphere 68.7
1892 Male, age 76, both hemispheres 56.6
Hippocampus, CA3
nTPM: 66.5
1891 Female, age 85, both hemispheres 84.6
2620 Female, age 94, left hemisphere 71.2
2137 Male, age 80, left hemisphere 64.8
1867 Male, age 76, both hemispheres 62.1
2436 Male, age 74, both hemispheres 62.1
2861 Female, age 67, both hemispheres 54.2
Parahippocampal cortex
nTPM: 61.6
2692 Male, age 74, both hemispheres 76.8
2532 Female, age 72, left hemisphere 74.7
1990 Female, age 91, right hemisphere 66.6
1850 Male, age 80, both hemispheres 62.9
2245 Female, age 91, both hemispheres 62.4
1933 Female, age 85, both hemispheres 60.8
2018 Male, age 76, both hemispheres 60.8
2693 Female, age 94, both hemispheres 58.1
2250 Female, age 67, right hemisphere 47.2
2622 Female, age 67, right hemisphere 45.9
Perirhinal gyrus
nTPM: 56.6
2521 Female, age 94, right hemisphere 68.4
1794 Male, age 80, right hemisphere 57.6
1847 Female, age 91, left hemisphere 56.5
1841 Female, age 85, right hemisphere 50.9
2848 Male, age 76, right hemisphere 49.4
Subiculum
nTPM: 81.7
2042 Male, age 76, both hemispheres 100.2
1901 Male, age 80, both hemispheres 92.4
1977 Female, age 85, both hemispheres 77.6
2729 Female, age 91, right hemisphere 75.0
2438 Female, age 94, left hemisphere 73.9
2619 Male, age 74, both hemispheres 71.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 66.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 66.0
Samples: 197

Max nTPM: 195.9
Min nTPM: 16.2
Std nTPM: 22.7
Median nTPM: 64.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 195.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 154.3
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 131.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 122.2
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 118.5
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 117.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 111.8
GTEX-1HBPI-0011-R1b-SM-A9SKF 50-59 years, male 111.3
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 108.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 108.6
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 107.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 76.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 76.6
FF:10153-102I9 76 years, female 81.6
FF:10169-103B7 60 years, female 71.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 87.4
Pig sample Sample description nTPM
Subiculum
nTPM: 55.4
Samples: 4

Max nTPM: 62.1
Min nTPM: 51.1
Sample A Female 62.1
Sample B Female 51.7
Sample C Male 51.1
Sample D Male 56.5
Dorsal hippocampus
nTPM: 87.4
Samples: 4

Max nTPM: 113.3
Min nTPM: 58.5
Sample A Female 113.3
Sample B Female 84.2
Sample C Male 93.6
Sample D Male 58.5
Entorhinal cortex
nTPM: 51.7
Samples: 4

Max nTPM: 52.8
Min nTPM: 50.2
Sample A Female 51.3
Sample B Female 52.8
Sample C Male 50.2
Sample D Male 52.6
Ventral hippocampus
nTPM: 75.2
Samples: 4

Max nTPM: 94.6
Min nTPM: 49.9
Sample A Female 78.3
Sample B Female 49.9
Sample C Male 77.8
Sample D Male 94.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 53.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 45.0
Samples: 4

Max nTPM: 46.4
Min nTPM: 42.9
Sample A Male 46.0
Sample B Male 42.9
Sample C Female 44.8
Sample D Female 46.4
Hippocampal formation
nTPM: 53.9
Samples: 4

Max nTPM: 62.3
Min nTPM: 46.5
Sample A Male 46.5
Sample B Male 53.6
Sample C Female 62.3
Sample D Female 53.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.1
68632178 Antisense, RP_050125_01_G12, Mouse strain C57BL/6J (56 days, male) 6.1

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