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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
187.7
nTPM
Monaco:
172.6
nTPM
Schmiedel:
63.8
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
187.7
HPA sample
nTPM
gdT-cell nTPM: 161.7
Samples: 6
Max nTPM: 202.4
Min nTPM: 129.9
P10809_1007
129.9
P10809_1022
202.4
P10809_1041
176.3
P10809_1060
160.7
P10809_1077
150.3
P10809_1098
150.3
MAIT T-cell nTPM: 161.9
Samples: 6
Max nTPM: 203.0
Min nTPM: 93.1
P10809_1006
93.1
P10809_1024
182.2
P10809_1043
182.5
P10809_1062
180.7
P10809_1083
129.7
P10809_1097
203.0
Memory CD4 T-cell nTPM: 171.6
Samples: 6
Max nTPM: 192.4
Min nTPM: 128.4
P10809_1014
128.4
P10809_1026
175.2
P10809_1045
172.1
P10809_1064
178.9
P10809_1086
192.4
P10809_1113
182.3
Memory CD8 T-cell nTPM: 156.8
Samples: 5
Max nTPM: 186.0
Min nTPM: 113.7
P10809_1012
113.7
P10809_1027
150.9
P10809_1046
186.0
P10809_1065
155.3
P10809_1111
178.0
Naive CD4 T-cell nTPM: 130.1
Samples: 6
Max nTPM: 198.3
Min nTPM: 77.5
P10809_1015
77.5
P10809_1030
107.7
P10809_1049
198.3
P10809_1068
131.2
P10809_1085
139.2
P10809_1112
126.9
Naive CD8 T-cell nTPM: 130.5
Samples: 6
Max nTPM: 171.6
Min nTPM: 87.2
P10809_1016
87.2
P10809_1031
93.9
P10809_1050
149.8
P10809_1069
160.4
P10809_1087
171.6
P10809_1110
120.2
T-reg nTPM: 187.7
Samples: 6
Max nTPM: 281.7
Min nTPM: 142.0
P10809_1018
148.0
P10809_1037
142.0
P10809_1056
281.7
P10809_1075
177.5
P10809_1094
153.7
P10809_1106
223.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
172.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 122.0
Samples: 4
Max nTPM: 159.8
Min nTPM: 77.1
RHH5202_R3573
128.9
RHH5230_R3602
122.1
RHH5259_R3631
77.1
RHH5288_R3660
159.8
Effector memory CD8 T-cell nTPM: 126.1
Samples: 4
Max nTPM: 145.0
Min nTPM: 99.5
RHH5203_R3574
145.0
RHH5231_R3603
132.4
RHH5260_R3632
99.5
RHH5289_R3661
127.6
MAIT T-cell nTPM: 135.9
Samples: 4
Max nTPM: 199.3
Min nTPM: 82.8
RHH5233_R3605
140.3
RHH5205_R3576
82.8
RHH5262_R3634
121.3
RHH5297_R3663
199.3
Memory CD4 T-cell TFH nTPM: 152.5
Samples: 4
Max nTPM: 241.8
Min nTPM: 120.0
RHH5300_R3666
127.6
RHH5236_R3608
241.8
RHH5265_R3637
120.5
RHH5208_R3579
120.0
Memory CD4 T-cell Th1 nTPM: 108.3
Samples: 4
Max nTPM: 170.4
Min nTPM: 71.5
RHH5210_R3581
98.1
RHH5302_R3668
170.4
RHH5238_R3610
93.2
RHH5267_R3639
71.5
Memory CD4 T-cell Th1/Th17 nTPM: 127.8
Samples: 4
Max nTPM: 203.7
Min nTPM: 53.9
RHH5303_R3669
203.7
RHH5211_R3582
143.7
RHH5239_R3611
53.9
RHH5268_R3640
110.0
Memory CD4 T-cell Th17 nTPM: 98.5
Samples: 4
Max nTPM: 136.6
Min nTPM: 63.4
RHH5304_R3670
104.1
RHH5212_R3583
136.6
RHH5240_R3612
63.4
RHH5269_R3641
89.8
Memory CD4 T-cell Th2 nTPM: 115.4
Samples: 4
Max nTPM: 164.9
Min nTPM: 91.7
RHH5305_R3671
111.6
RHH5213_R3584
93.5
RHH5241_R3613
164.9
RHH5270_R3642
91.7
Naive CD4 T-cell nTPM: 75.8
Samples: 4
Max nTPM: 111.9
Min nTPM: 55.7
RHH5306_R3672
73.8
RHH5214_R3585
111.9
RHH5242_R3614
55.7
RHH5271_R3643
61.6
Naive CD8 T-cell nTPM: 79.1
Samples: 4
Max nTPM: 118.9
Min nTPM: 52.0
RHH5201_R3572
88.8
RHH5229_R3601
52.0
RHH5258_R3630
118.9
RHH5287_R3659
56.6
Non-Vd2 gdTCR nTPM: 153.9
Samples: 4
Max nTPM: 200.0
Min nTPM: 77.4
RHH5235_R3607
77.4
RHH5264_R3636
190.4
RHH5207_R3578
147.7
RHH5299_R3665
200.0
T-reg nTPM: 133.9
Samples: 4
Max nTPM: 193.3
Min nTPM: 75.3
RHH5301_R3667
164.8
RHH5237_R3609
193.3
RHH5266_R3638
75.3
RHH5209_R3580
102.2
Terminal effector memory CD4 T-cell nTPM: 118.2
Samples: 2
Max nTPM: 153.2
Min nTPM: 83.1
RHH5243_R3615
83.1
RHH5272_R3644
153.2
Terminal effector memory CD8 T-cell nTPM: 172.6
Samples: 4
Max nTPM: 227.9
Min nTPM: 115.9
RHH5232_R3604
154.4
RHH5204_R3575
227.9
RHH5261_R3633
115.9
RHH5296_R3662
192.2
Vd2 gdTCR nTPM: 168.7
Samples: 4
Max nTPM: 260.0
Min nTPM: 102.2
RHH5234_R3606
118.3
RHH5206_R3577
260.0
RHH5263_R3635
102.2
RHH5298_R3664
194.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
