HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:64.5 nTPM
HPA Brain:57.3 nTPM
GTEx:64.5 nTPM
FANTOM5:36.8 Scaled Tags Per Million
Pig:51.8 nTPM
Mouse:71.4 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047739
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 57.3
Sample id Sample description nTPM
Hippocampus
nTPM: 57.3
2621 Female, age 67, right hemisphere 65.4
2529 Female, age 94, left hemisphere 61.5
2148 Female, age 91, left hemisphere 59.3
1855 Male, age 76, left hemisphere 54.9
1898 Male, age 80, left hemisphere 53.4
1911 Female, age 85, right hemisphere 49.3
Dentate gyrus
nTPM: 50.2
2531 Female, age 67, both hemispheres 62.8
2530 Female, age 94, left hemisphere 52.7
1927 Female, age 91, both hemispheres 48.7
2246 Female, age 85, both hemispheres 47.9
2010 Male, age 76, both hemispheres 44.6
2528 Male, age 74, both hemispheres 44.5
Entorhinal gyrus
nTPM: 51.2
2686 Male, age 75, right hemisphere 60.2
2613 Female, age 94, left hemisphere 51.4
1787 Male, age 76, left hemisphere 50.8
2764 Male, age 80, right hemisphere 49.9
1938 Female, age 85, left hemisphere 49.1
2117 Female, age 91, right hemisphere 46.0
Hippocampus, CA1
nTPM: 45.9
2082 Female, age 91, right hemisphere 50.4
2527 Male, age 74, both hemispheres 49.6
2749 Male, age 80, left hemisphere 48.7
1873 Female, age 85, both hemispheres 42.7
2045 Male, age 76, both hemispheres 38.3
Hippocampus, CA2
nTPM: 49.5
1963 Male, age 80, left hemisphere 64.8
2113 Female, age 91, right hemisphere 54.9
1940 Female, age 85, left hemisphere 47.5
1892 Male, age 76, both hemispheres 45.4
2437 Female, age 94, left hemisphere 44.4
2249 Male, age 74, both hemispheres 40.0
Hippocampus, CA3
nTPM: 52.1
2861 Female, age 67, both hemispheres 79.8
2620 Female, age 94, left hemisphere 53.6
2137 Male, age 80, left hemisphere 53.2
1891 Female, age 85, both hemispheres 45.7
1867 Male, age 76, both hemispheres 41.3
2436 Male, age 74, both hemispheres 39.0
Parahippocampal cortex
nTPM: 48.7
2245 Female, age 91, both hemispheres 59.6
2622 Female, age 67, right hemisphere 55.9
2018 Male, age 76, both hemispheres 50.7
2532 Female, age 72, left hemisphere 50.2
2250 Female, age 67, right hemisphere 48.5
1933 Female, age 85, both hemispheres 47.1
2692 Male, age 74, both hemispheres 45.7
2693 Female, age 94, both hemispheres 44.4
1850 Male, age 80, both hemispheres 43.0
1990 Female, age 91, right hemisphere 42.1
Perirhinal gyrus
nTPM: 48.8
2521 Female, age 94, right hemisphere 58.5
1847 Female, age 91, left hemisphere 52.0
1794 Male, age 80, right hemisphere 47.2
1841 Female, age 85, right hemisphere 44.5
2848 Male, age 76, right hemisphere 41.7
Subiculum
nTPM: 45.9
2619 Male, age 74, both hemispheres 49.0
2729 Female, age 91, right hemisphere 47.5
1977 Female, age 85, both hemispheres 47.0
2438 Female, age 94, left hemisphere 45.5
2042 Male, age 76, both hemispheres 44.5
1901 Male, age 80, both hemispheres 41.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 64.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 64.5
Samples: 197

Max nTPM: 187.4
Min nTPM: 12.3
Std nTPM: 25.5
Median nTPM: 59.3
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 187.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 180.0
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 148.7
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 141.6
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 132.0
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 126.9
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 123.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 119.5
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 114.6
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 113.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 112.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 36.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 36.8
FF:10153-102I9 76 years, female 41.5
FF:10169-103B7 60 years, female 32.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 51.8
Pig sample Sample description nTPM
Subiculum
nTPM: 33.4
Samples: 4

Max nTPM: 43.0
Min nTPM: 28.9
Sample A Female 43.0
Sample B Female 30.6
Sample C Male 30.9
Sample D Male 28.9
Dorsal hippocampus
nTPM: 29.6
Samples: 4

Max nTPM: 34.9
Min nTPM: 20.7
Sample A Female 34.9
Sample B Female 31.3
Sample C Male 31.6
Sample D Male 20.7
Entorhinal cortex
nTPM: 51.8
Samples: 4

Max nTPM: 71.5
Min nTPM: 41.6
Sample A Female 51.0
Sample B Female 43.0
Sample C Male 71.5
Sample D Male 41.6
Ventral hippocampus
nTPM: 29.1
Samples: 4

Max nTPM: 37.4
Min nTPM: 23.3
Sample A Female 23.3
Sample B Female 23.7
Sample C Male 37.4
Sample D Male 32.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 71.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 71.4
Samples: 4

Max nTPM: 76.4
Min nTPM: 62.4
Sample A Male 71.9
Sample B Male 76.4
Sample C Female 62.4
Sample D Female 74.8
Hippocampal formation
nTPM: 52.5
Samples: 4

Max nTPM: 59.8
Min nTPM: 47.9
Sample A Male 59.8
Sample B Male 47.9
Sample C Female 50.9
Sample D Female 51.2

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