HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:100.9 nTPM
HPA Brain:114.3 nTPM
GTEx:100.9 nTPM
FANTOM5:323.3 Scaled Tags Per Million
Pig:61.1 nTPM
Mouse:94.7 nTPM
Allen mouse:2.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006983Antibody CAB008663
Glial cells MediumHigh
Neuronal cells HighMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 114.3
Sample id Sample description nTPM
Hippocampus
nTPM: 114.3
2148 Female, age 91, left hemisphere 142.9
1898 Male, age 80, left hemisphere 128.2
1911 Female, age 85, right hemisphere 126.2
1855 Male, age 76, left hemisphere 120.3
2529 Female, age 94, left hemisphere 90.3
2621 Female, age 67, right hemisphere 77.7
Dentate gyrus
nTPM: 92.8
2528 Male, age 74, both hemispheres 152.5
2246 Female, age 85, both hemispheres 102.0
2010 Male, age 76, both hemispheres 92.0
1927 Female, age 91, both hemispheres 89.5
2530 Female, age 94, left hemisphere 64.3
2531 Female, age 67, both hemispheres 56.6
Entorhinal gyrus
nTPM: 72.6
2117 Female, age 91, right hemisphere 137.1
1938 Female, age 85, left hemisphere 75.5
1787 Male, age 76, left hemisphere 67.9
2764 Male, age 80, right hemisphere 57.7
2686 Male, age 75, right hemisphere 53.5
2613 Female, age 94, left hemisphere 44.0
Hippocampus, CA1
nTPM: 100.1
1873 Female, age 85, both hemispheres 133.5
2527 Male, age 74, both hemispheres 122.2
2045 Male, age 76, both hemispheres 87.3
2082 Female, age 91, right hemisphere 86.8
2749 Male, age 80, left hemisphere 70.8
Hippocampus, CA2
nTPM: 87.6
2249 Male, age 74, both hemispheres 123.3
2113 Female, age 91, right hemisphere 108.1
1940 Female, age 85, left hemisphere 82.8
1963 Male, age 80, left hemisphere 81.0
2437 Female, age 94, left hemisphere 65.5
1892 Male, age 76, both hemispheres 64.7
Hippocampus, CA3
nTPM: 88.7
1891 Female, age 85, both hemispheres 114.6
2436 Male, age 74, both hemispheres 94.9
2620 Female, age 94, left hemisphere 94.9
1867 Male, age 76, both hemispheres 79.5
2137 Male, age 80, left hemisphere 75.6
2861 Female, age 67, both hemispheres 72.8
Parahippocampal cortex
nTPM: 72.7
2692 Male, age 74, both hemispheres 100.7
1990 Female, age 91, right hemisphere 81.9
2018 Male, age 76, both hemispheres 79.9
1850 Male, age 80, both hemispheres 74.9
2245 Female, age 91, both hemispheres 71.1
1933 Female, age 85, both hemispheres 70.6
2622 Female, age 67, right hemisphere 68.5
2250 Female, age 67, right hemisphere 65.9
2693 Female, age 94, both hemispheres 58.8
2532 Female, age 72, left hemisphere 54.7
Perirhinal gyrus
nTPM: 65.0
1794 Male, age 80, right hemisphere 75.5
1847 Female, age 91, left hemisphere 72.5
1841 Female, age 85, right hemisphere 69.0
2521 Female, age 94, right hemisphere 56.6
2848 Male, age 76, right hemisphere 51.2
Subiculum
nTPM: 102.7
2729 Female, age 91, right hemisphere 175.3
2619 Male, age 74, both hemispheres 123.8
2042 Male, age 76, both hemispheres 94.4
1901 Male, age 80, both hemispheres 83.3
2438 Female, age 94, left hemisphere 75.6
1977 Female, age 85, both hemispheres 64.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 100.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 100.9
Samples: 197

Max nTPM: 252.2
Min nTPM: 39.0
Std nTPM: 33.3
Median nTPM: 95.7
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 252.2
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 237.5
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 201.4
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 177.0
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 170.8
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 166.4
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 165.2
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 164.3
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 164.2
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 164.0
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 164.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 323.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 323.3
FF:10153-102I9 76 years, female 330.9
FF:10169-103B7 60 years, female 315.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 61.1
Pig sample Sample description nTPM
Subiculum
nTPM: 47.2
Samples: 4

Max nTPM: 57.3
Min nTPM: 38.9
Sample A Female 49.6
Sample B Female 43.0
Sample C Male 38.9
Sample D Male 57.3
Dorsal hippocampus
nTPM: 61.1
Samples: 4

Max nTPM: 81.1
Min nTPM: 42.8
Sample A Female 81.1
Sample B Female 54.6
Sample C Male 65.8
Sample D Male 42.8
Entorhinal cortex
nTPM: 45.2
Samples: 4

Max nTPM: 53.7
Min nTPM: 39.0
Sample A Female 48.8
Sample B Female 53.7
Sample C Male 39.0
Sample D Male 39.1
Ventral hippocampus
nTPM: 53.6
Samples: 4

Max nTPM: 61.7
Min nTPM: 38.0
Sample A Female 58.8
Sample B Female 38.0
Sample C Male 55.9
Sample D Male 61.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 94.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 88.6
Samples: 4

Max nTPM: 103.1
Min nTPM: 76.9
Sample A Male 90.2
Sample B Male 76.9
Sample C Female 103.1
Sample D Female 84.2
Hippocampal formation
nTPM: 94.8
Samples: 4

Max nTPM: 109.4
Min nTPM: 79.7
Sample A Male 106.1
Sample B Male 83.8
Sample C Female 79.7
Sample D Female 109.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.0
686199 Antisense, RP_040916_01_A07, Mouse strain C57BL/6J (56 days, male) 2.0

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