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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
48.1
nTPM
Monaco:
155.1
nTPM
Schmiedel:
222.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
48.1
HPA sample
nTPM
gdT-cell nTPM: 29.9
Samples: 6
Max nTPM: 34.3
Min nTPM: 25.4
P10809_1007
27.1
P10809_1022
32.2
P10809_1041
25.4
P10809_1060
27.6
P10809_1077
32.5
P10809_1098
34.3
MAIT T-cell nTPM: 32.8
Samples: 6
Max nTPM: 42.6
Min nTPM: 24.1
P10809_1006
29.8
P10809_1024
42.6
P10809_1043
24.1
P10809_1062
28.6
P10809_1083
32.4
P10809_1097
39.3
Memory CD4 T-cell nTPM: 29.9
Samples: 6
Max nTPM: 40.1
Min nTPM: 18.9
P10809_1014
37.5
P10809_1026
40.1
P10809_1045
18.9
P10809_1064
22.1
P10809_1086
27.7
P10809_1113
33.2
Memory CD8 T-cell nTPM: 38.3
Samples: 5
Max nTPM: 48.3
Min nTPM: 24.4
P10809_1012
40.7
P10809_1027
41.2
P10809_1046
24.4
P10809_1065
37.1
P10809_1111
48.3
Naive CD4 T-cell nTPM: 39.8
Samples: 6
Max nTPM: 56.8
Min nTPM: 20.8
P10809_1015
56.8
P10809_1030
40.1
P10809_1049
20.8
P10809_1068
42.8
P10809_1085
29.8
P10809_1112
48.7
Naive CD8 T-cell nTPM: 48.1
Samples: 6
Max nTPM: 73.2
Min nTPM: 27.8
P10809_1016
73.2
P10809_1031
48.4
P10809_1050
27.8
P10809_1069
40.0
P10809_1087
30.0
P10809_1110
68.9
T-reg nTPM: 36.2
Samples: 6
Max nTPM: 49.0
Min nTPM: 19.3
P10809_1018
40.3
P10809_1037
29.7
P10809_1056
19.3
P10809_1075
41.9
P10809_1094
36.9
P10809_1106
49.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
155.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 126.6
Samples: 4
Max nTPM: 150.3
Min nTPM: 87.0
RHH5202_R3573
150.3
RHH5230_R3602
130.6
RHH5259_R3631
87.0
RHH5288_R3660
138.6
Effector memory CD8 T-cell nTPM: 106.8
Samples: 4
Max nTPM: 134.9
Min nTPM: 77.2
RHH5203_R3574
107.3
RHH5231_R3603
134.9
RHH5260_R3632
77.2
RHH5289_R3661
107.8
MAIT T-cell nTPM: 102.2
Samples: 4
Max nTPM: 109.6
Min nTPM: 93.5
RHH5233_R3605
109.6
RHH5205_R3576
93.5
RHH5262_R3634
109.2
RHH5297_R3663
96.3
Memory CD4 T-cell TFH nTPM: 88.6
Samples: 4
Max nTPM: 101.2
Min nTPM: 80.7
RHH5300_R3666
83.2
RHH5236_R3608
101.2
RHH5265_R3637
80.7
RHH5208_R3579
89.4
Memory CD4 T-cell Th1 nTPM: 86.1
Samples: 4
Max nTPM: 99.8
Min nTPM: 63.9
RHH5210_R3581
87.8
RHH5302_R3668
99.8
RHH5238_R3610
63.9
RHH5267_R3639
93.0
Memory CD4 T-cell Th1/Th17 nTPM: 80.1
Samples: 4
Max nTPM: 93.0
Min nTPM: 74.4
RHH5303_R3669
93.0
RHH5211_R3582
74.4
RHH5239_R3611
75.1
RHH5268_R3640
78.0
Memory CD4 T-cell Th17 nTPM: 68.4
Samples: 4
Max nTPM: 78.3
Min nTPM: 58.3
RHH5304_R3670
78.3
RHH5212_R3583
61.6
RHH5240_R3612
75.5
RHH5269_R3641
58.3
Memory CD4 T-cell Th2 nTPM: 92.8
Samples: 4
Max nTPM: 115.8
Min nTPM: 80.6
RHH5305_R3671
93.1
RHH5213_R3584
80.6
RHH5241_R3613
115.8
RHH5270_R3642
81.7
Naive CD4 T-cell nTPM: 104.2
Samples: 4
Max nTPM: 123.3
Min nTPM: 82.0
RHH5306_R3672
119.6
RHH5214_R3585
82.0
RHH5242_R3614
123.3
RHH5271_R3643
91.7
Naive CD8 T-cell nTPM: 155.1
Samples: 4
Max nTPM: 178.4
Min nTPM: 113.6
RHH5201_R3572
154.8
RHH5229_R3601
113.6
RHH5258_R3630
178.4
RHH5287_R3659
173.4
Non-Vd2 gdTCR nTPM: 113.3
Samples: 4
Max nTPM: 127.5
Min nTPM: 99.3
RHH5235_R3607
120.1
RHH5264_R3636
127.5
RHH5207_R3578
106.1
RHH5299_R3665
99.3
T-reg nTPM: 91.5
Samples: 4
Max nTPM: 105.4
Min nTPM: 81.8
RHH5301_R3667
90.5
RHH5237_R3609
88.3
RHH5266_R3638
105.4
RHH5209_R3580
81.8
Terminal effector memory CD4 T-cell nTPM: 81.3
Samples: 2
Max nTPM: 84.8
Min nTPM: 77.7
RHH5243_R3615
84.8
RHH5272_R3644
77.7
Terminal effector memory CD8 T-cell nTPM: 98.2
Samples: 4
Max nTPM: 110.6
Min nTPM: 87.4
RHH5232_R3604
110.6
RHH5204_R3575
92.3
RHH5261_R3633
87.4
RHH5296_R3662
102.3
Vd2 gdTCR nTPM: 101.0
Samples: 4
Max nTPM: 133.0
Min nTPM: 82.2
RHH5234_R3606
133.0
RHH5206_R3577
82.2
RHH5263_R3635
88.9
RHH5298_R3664
100.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
