HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:40.2 nTPM
HPA Brain:16.2 nTPM
GTEx:40.2 nTPM
FANTOM5:98.4 Scaled Tags Per Million
Pig:26.8 nTPM
Mouse:60.9 nTPM
Allen mouse:4.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA018265
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 16.2
Sample id Sample description nTPM
Hippocampus
nTPM: 16.2
2529 Female, age 94, left hemisphere 18.5
1898 Male, age 80, left hemisphere 17.2
2621 Female, age 67, right hemisphere 17.1
1855 Male, age 76, left hemisphere 16.1
1911 Female, age 85, right hemisphere 16.1
2148 Female, age 91, left hemisphere 12.3
Dentate gyrus
nTPM: 14.9
2010 Male, age 76, both hemispheres 19.1
2530 Female, age 94, left hemisphere 18.6
1927 Female, age 91, both hemispheres 14.0
2531 Female, age 67, both hemispheres 13.2
2246 Female, age 85, both hemispheres 12.9
2528 Male, age 74, both hemispheres 11.3
Entorhinal gyrus
nTPM: 13.7
1787 Male, age 76, left hemisphere 15.5
1938 Female, age 85, left hemisphere 15.3
2117 Female, age 91, right hemisphere 14.4
2686 Male, age 75, right hemisphere 13.8
2764 Male, age 80, right hemisphere 12.2
2613 Female, age 94, left hemisphere 11.0
Hippocampus, CA1
nTPM: 16.0
1873 Female, age 85, both hemispheres 17.6
2749 Male, age 80, left hemisphere 17.5
2045 Male, age 76, both hemispheres 17.0
2527 Male, age 74, both hemispheres 16.1
2082 Female, age 91, right hemisphere 11.7
Hippocampus, CA2
nTPM: 15.3
1892 Male, age 76, both hemispheres 19.1
1940 Female, age 85, left hemisphere 17.3
2437 Female, age 94, left hemisphere 15.0
1963 Male, age 80, left hemisphere 14.7
2249 Male, age 74, both hemispheres 13.2
2113 Female, age 91, right hemisphere 12.7
Hippocampus, CA3
nTPM: 14.3
1891 Female, age 85, both hemispheres 17.6
1867 Male, age 76, both hemispheres 17.4
2137 Male, age 80, left hemisphere 16.3
2436 Male, age 74, both hemispheres 14.4
2861 Female, age 67, both hemispheres 11.5
2620 Female, age 94, left hemisphere 8.6
Parahippocampal cortex
nTPM: 13.9
1850 Male, age 80, both hemispheres 17.4
2018 Male, age 76, both hemispheres 17.2
2245 Female, age 91, both hemispheres 15.0
2250 Female, age 67, right hemisphere 14.6
2692 Male, age 74, both hemispheres 14.2
1933 Female, age 85, both hemispheres 13.9
1990 Female, age 91, right hemisphere 13.9
2532 Female, age 72, left hemisphere 11.8
2622 Female, age 67, right hemisphere 11.6
2693 Female, age 94, both hemispheres 9.4
Perirhinal gyrus
nTPM: 14.4
1847 Female, age 91, left hemisphere 16.2
1841 Female, age 85, right hemisphere 15.8
1794 Male, age 80, right hemisphere 14.8
2848 Male, age 76, right hemisphere 13.6
2521 Female, age 94, right hemisphere 12.0
Subiculum
nTPM: 14.6
2042 Male, age 76, both hemispheres 18.8
1901 Male, age 80, both hemispheres 16.6
2438 Female, age 94, left hemisphere 13.5
2729 Female, age 91, right hemisphere 13.4
1977 Female, age 85, both hemispheres 13.2
2619 Male, age 74, both hemispheres 12.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 40.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 40.2
Samples: 197

Max nTPM: 103.1
Min nTPM: 24.6
Std nTPM: 8.8
Median nTPM: 38.5
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 103.1
GTEX-NPJ7-0011-R1a-SM-3GACT 60-69 years, female 80.9
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 68.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 60.5
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 59.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 58.0
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 57.0
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 57.0
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 56.1
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 55.2
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 54.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 98.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 98.4
FF:10153-102I9 76 years, female 108.6
FF:10169-103B7 60 years, female 88.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 26.8
Pig sample Sample description nTPM
Subiculum
nTPM: 25.5
Samples: 4

Max nTPM: 32.1
Min nTPM: 20.8
Sample A Female 32.1
Sample B Female 22.4
Sample C Male 20.8
Sample D Male 26.6
Dorsal hippocampus
nTPM: 26.8
Samples: 4

Max nTPM: 32.6
Min nTPM: 19.4
Sample A Female 32.6
Sample B Female 25.3
Sample C Male 30.0
Sample D Male 19.4
Entorhinal cortex
nTPM: 24.8
Samples: 4

Max nTPM: 26.5
Min nTPM: 23.3
Sample A Female 26.5
Sample B Female 25.5
Sample C Male 23.8
Sample D Male 23.3
Ventral hippocampus
nTPM: 23.2
Samples: 4

Max nTPM: 26.3
Min nTPM: 21.1
Sample A Female 24.2
Sample B Female 21.1
Sample C Male 21.1
Sample D Male 26.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 60.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 58.2
Samples: 4

Max nTPM: 61.3
Min nTPM: 50.0
Sample A Male 60.3
Sample B Male 61.0
Sample C Female 61.3
Sample D Female 50.0
Hippocampal formation
nTPM: 61.0
Samples: 4

Max nTPM: 62.0
Min nTPM: 59.6
Sample A Male 62.0
Sample B Male 59.6
Sample C Female 61.0
Sample D Female 61.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.5
69549608 Antisense, RP_050203_02_A07, Mouse strain C57BL/6J (56 days, male) 4.5

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