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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
129.5
nTPM
Monaco:
112.4
nTPM
Schmiedel:
110.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
129.5
HPA sample
nTPM
gdT-cell nTPM: 79.3
Samples: 6
Max nTPM: 93.9
Min nTPM: 57.0
P10809_1007
57.0
P10809_1022
72.3
P10809_1041
80.2
P10809_1060
81.5
P10809_1077
90.9
P10809_1098
93.9
MAIT T-cell nTPM: 95.9
Samples: 6
Max nTPM: 113.6
Min nTPM: 69.8
P10809_1006
69.8
P10809_1024
113.6
P10809_1043
88.3
P10809_1062
96.6
P10809_1083
97.1
P10809_1097
110.0
Memory CD4 T-cell nTPM: 102.8
Samples: 6
Max nTPM: 120.7
Min nTPM: 81.8
P10809_1014
81.8
P10809_1026
97.1
P10809_1045
96.7
P10809_1064
115.2
P10809_1086
120.7
P10809_1113
105.0
Memory CD8 T-cell nTPM: 99.9
Samples: 5
Max nTPM: 120.5
Min nTPM: 70.1
P10809_1012
70.1
P10809_1027
100.2
P10809_1046
89.2
P10809_1065
120.5
P10809_1111
119.5
Naive CD4 T-cell nTPM: 108.8
Samples: 6
Max nTPM: 137.6
Min nTPM: 84.7
P10809_1015
84.7
P10809_1030
103.9
P10809_1049
137.6
P10809_1068
115.5
P10809_1085
115.2
P10809_1112
95.7
Naive CD8 T-cell nTPM: 102.3
Samples: 6
Max nTPM: 128.5
Min nTPM: 66.2
P10809_1016
66.2
P10809_1031
94.6
P10809_1050
100.6
P10809_1069
128.5
P10809_1087
122.2
P10809_1110
101.9
T-reg nTPM: 129.6
Samples: 6
Max nTPM: 182.1
Min nTPM: 95.6
P10809_1018
95.6
P10809_1037
119.1
P10809_1056
182.1
P10809_1075
130.2
P10809_1094
115.7
P10809_1106
134.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
112.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 94.4
Samples: 4
Max nTPM: 129.9
Min nTPM: 52.0
RHH5202_R3573
129.9
RHH5230_R3602
92.1
RHH5259_R3631
52.0
RHH5288_R3660
103.7
Effector memory CD8 T-cell nTPM: 99.3
Samples: 4
Max nTPM: 125.8
Min nTPM: 74.6
RHH5203_R3574
125.8
RHH5231_R3603
110.1
RHH5260_R3632
74.6
RHH5289_R3661
86.6
MAIT T-cell nTPM: 81.5
Samples: 4
Max nTPM: 101.8
Min nTPM: 68.1
RHH5233_R3605
80.2
RHH5205_R3576
68.1
RHH5262_R3634
75.7
RHH5297_R3663
101.8
Memory CD4 T-cell TFH nTPM: 98.0
Samples: 4
Max nTPM: 105.1
Min nTPM: 81.9
RHH5300_R3666
81.9
RHH5236_R3608
104.9
RHH5265_R3637
100.2
RHH5208_R3579
105.1
Memory CD4 T-cell Th1 nTPM: 83.3
Samples: 4
Max nTPM: 106.3
Min nTPM: 53.6
RHH5210_R3581
91.2
RHH5302_R3668
106.3
RHH5238_R3610
53.6
RHH5267_R3639
82.0
Memory CD4 T-cell Th1/Th17 nTPM: 96.0
Samples: 4
Max nTPM: 138.7
Min nTPM: 71.8
RHH5303_R3669
100.0
RHH5211_R3582
138.7
RHH5239_R3611
71.8
RHH5268_R3640
73.3
Memory CD4 T-cell Th17 nTPM: 81.2
Samples: 4
Max nTPM: 105.4
Min nTPM: 50.2
RHH5304_R3670
74.0
RHH5212_R3583
105.4
RHH5240_R3612
95.0
RHH5269_R3641
50.2
Memory CD4 T-cell Th2 nTPM: 102.3
Samples: 4
Max nTPM: 126.8
Min nTPM: 72.0
RHH5305_R3671
87.2
RHH5213_R3584
126.8
RHH5241_R3613
123.3
RHH5270_R3642
72.0
Naive CD4 T-cell nTPM: 111.2
Samples: 4
Max nTPM: 147.6
Min nTPM: 72.6
RHH5306_R3672
99.2
RHH5214_R3585
125.3
RHH5242_R3614
147.6
RHH5271_R3643
72.6
Naive CD8 T-cell nTPM: 98.4
Samples: 4
Max nTPM: 121.8
Min nTPM: 69.0
RHH5201_R3572
121.8
RHH5229_R3601
69.0
RHH5258_R3630
104.7
RHH5287_R3659
98.1
Non-Vd2 gdTCR nTPM: 104.9
Samples: 4
Max nTPM: 123.9
Min nTPM: 80.8
RHH5235_R3607
93.6
RHH5264_R3636
123.9
RHH5207_R3578
121.2
RHH5299_R3665
80.8
T-reg nTPM: 111.5
Samples: 4
Max nTPM: 153.4
Min nTPM: 75.0
RHH5301_R3667
105.9
RHH5237_R3609
153.4
RHH5266_R3638
75.0
RHH5209_R3580
111.5
Terminal effector memory CD4 T-cell nTPM: 86.8
Samples: 2
Max nTPM: 107.1
Min nTPM: 66.5
RHH5243_R3615
66.5
RHH5272_R3644
107.1
Terminal effector memory CD8 T-cell nTPM: 111.1
Samples: 4
Max nTPM: 143.2
Min nTPM: 88.0
RHH5232_R3604
111.9
RHH5204_R3575
143.2
RHH5261_R3633
88.0
RHH5296_R3662
101.1
Vd2 gdTCR nTPM: 112.4
Samples: 4
Max nTPM: 159.8
Min nTPM: 87.1
RHH5234_R3606
110.7
RHH5206_R3577
159.8
RHH5263_R3635
87.1
RHH5298_R3664
91.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
