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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
37.7
nTPM
Monaco:
26.7
nTPM
Schmiedel:
280.1
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
37.7
HPA sample
nTPM
gdT-cell nTPM: 25.6
Samples: 6
Max nTPM: 47.2
Min nTPM: 13.9
P10809_1007
14.7
P10809_1022
33.3
P10809_1041
13.9
P10809_1060
47.2
P10809_1077
29.6
P10809_1098
15.0
MAIT T-cell nTPM: 26.7
Samples: 6
Max nTPM: 45.9
Min nTPM: 13.8
P10809_1006
17.7
P10809_1024
45.9
P10809_1043
23.8
P10809_1062
32.7
P10809_1083
26.4
P10809_1097
13.8
Memory CD4 T-cell nTPM: 26.9
Samples: 6
Max nTPM: 62.8
Min nTPM: 16.4
P10809_1014
16.4
P10809_1026
62.8
P10809_1045
21.1
P10809_1064
24.1
P10809_1086
18.5
P10809_1113
18.3
Memory CD8 T-cell nTPM: 21.7
Samples: 5
Max nTPM: 29.8
Min nTPM: 13.0
P10809_1012
16.4
P10809_1027
29.8
P10809_1046
20.4
P10809_1065
28.8
P10809_1111
13.0
Naive CD4 T-cell nTPM: 25.4
Samples: 6
Max nTPM: 36.4
Min nTPM: 18.2
P10809_1015
20.8
P10809_1030
36.4
P10809_1049
25.7
P10809_1068
33.1
P10809_1085
18.2
P10809_1112
18.2
Naive CD8 T-cell nTPM: 17.4
Samples: 6
Max nTPM: 28.6
Min nTPM: 8.1
P10809_1016
20.1
P10809_1031
23.0
P10809_1050
8.4
P10809_1069
28.6
P10809_1087
15.9
P10809_1110
8.1
T-reg nTPM: 37.7
Samples: 6
Max nTPM: 55.2
Min nTPM: 25.2
P10809_1018
25.2
P10809_1037
55.2
P10809_1056
40.8
P10809_1075
39.6
P10809_1094
36.9
P10809_1106
28.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
26.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 17.2
Samples: 4
Max nTPM: 30.6
Min nTPM: 8.6
RHH5202_R3573
14.7
RHH5230_R3602
14.8
RHH5259_R3631
8.6
RHH5288_R3660
30.6
Effector memory CD8 T-cell nTPM: 9.7
Samples: 4
Max nTPM: 23.3
Min nTPM: 2.9
RHH5203_R3574
23.3
RHH5231_R3603
4.2
RHH5260_R3632
8.4
RHH5289_R3661
2.9
MAIT T-cell nTPM: 9.8
Samples: 4
Max nTPM: 17.0
Min nTPM: 4.3
RHH5233_R3605
17.0
RHH5205_R3576
8.5
RHH5262_R3634
9.5
RHH5297_R3663
4.3
Memory CD4 T-cell TFH nTPM: 26.7
Samples: 4
Max nTPM: 50.2
Min nTPM: 2.7
RHH5300_R3666
21.5
RHH5236_R3608
2.7
RHH5265_R3637
32.4
RHH5208_R3579
50.2
Memory CD4 T-cell Th1 nTPM: 17.1
Samples: 4
Max nTPM: 38.2
Min nTPM: 4.9
RHH5210_R3581
38.2
RHH5302_R3668
11.4
RHH5238_R3610
13.7
RHH5267_R3639
4.9
Memory CD4 T-cell Th1/Th17 nTPM: 9.4
Samples: 4
Max nTPM: 17.2
Min nTPM: 4.2
RHH5303_R3669
17.2
RHH5211_R3582
7.9
RHH5239_R3611
4.2
RHH5268_R3640
8.4
Memory CD4 T-cell Th17 nTPM: 8.9
Samples: 4
Max nTPM: 13.5
Min nTPM: 4.0
RHH5304_R3670
4.0
RHH5212_R3583
13.5
RHH5240_R3612
9.6
RHH5269_R3641
8.5
Memory CD4 T-cell Th2 nTPM: 7.6
Samples: 4
Max nTPM: 12.3
Min nTPM: 4.4
RHH5305_R3671
12.3
RHH5213_R3584
4.8
RHH5241_R3613
4.4
RHH5270_R3642
8.8
Naive CD4 T-cell nTPM: 8.7
Samples: 4
Max nTPM: 13.8
Min nTPM: 3.6
RHH5306_R3672
13.8
RHH5214_R3585
3.6
RHH5242_R3614
13.5
RHH5271_R3643
3.7
Naive CD8 T-cell nTPM: 4.0
Samples: 4
Max nTPM: 4.6
Min nTPM: 2.8
RHH5201_R3572
2.8
RHH5229_R3601
4.3
RHH5258_R3630
4.6
RHH5287_R3659
4.2
Non-Vd2 gdTCR nTPM: 13.7
Samples: 4
Max nTPM: 29.0
Min nTPM: 5.0
RHH5235_R3607
5.0
RHH5264_R3636
9.4
RHH5207_R3578
11.4
RHH5299_R3665
29.0
T-reg nTPM: 8.5
Samples: 4
Max nTPM: 11.5
Min nTPM: 5.6
RHH5301_R3667
5.6
RHH5237_R3609
10.8
RHH5266_R3638
11.5
RHH5209_R3580
6.0
Terminal effector memory CD4 T-cell nTPM: 8.9
Samples: 2
Max nTPM: 13.3
Min nTPM: 4.4
RHH5243_R3615
4.4
RHH5272_R3644
13.3
Terminal effector memory CD8 T-cell nTPM: 17.5
Samples: 4
Max nTPM: 51.0
Min nTPM: 5.0
RHH5232_R3604
6.2
RHH5204_R3575
5.0
RHH5261_R3633
7.7
RHH5296_R3662
51.0
Vd2 gdTCR nTPM: 13.9
Samples: 4
Max nTPM: 29.4
Min nTPM: 4.3
RHH5234_R3606
15.2
RHH5206_R3577
4.3
RHH5263_R3635
6.6
RHH5298_R3664
29.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
