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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
143.7
nTPM
Monaco:
97.2
nTPM
Schmiedel:
28.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
143.7
HPA sample
nTPM
gdT-cell nTPM: 54.0
Samples: 6
Max nTPM: 83.2
Min nTPM: 38.2
P10809_1007
83.2
P10809_1022
53.4
P10809_1041
53.2
P10809_1060
38.2
P10809_1077
46.8
P10809_1098
49.3
MAIT T-cell nTPM: 32.3
Samples: 6
Max nTPM: 50.8
Min nTPM: 21.7
P10809_1006
50.8
P10809_1024
21.7
P10809_1043
25.9
P10809_1062
34.4
P10809_1083
32.3
P10809_1097
28.4
Memory CD4 T-cell nTPM: 48.0
Samples: 6
Max nTPM: 61.7
Min nTPM: 33.0
P10809_1014
61.7
P10809_1026
45.0
P10809_1045
51.4
P10809_1064
54.8
P10809_1086
33.0
P10809_1113
42.0
Memory CD8 T-cell nTPM: 68.3
Samples: 5
Max nTPM: 95.7
Min nTPM: 44.2
P10809_1012
95.7
P10809_1027
95.5
P10809_1046
47.4
P10809_1065
44.2
P10809_1111
58.6
Naive CD4 T-cell nTPM: 78.0
Samples: 6
Max nTPM: 117.0
Min nTPM: 44.2
P10809_1015
117.0
P10809_1030
58.2
P10809_1049
95.5
P10809_1068
80.0
P10809_1085
44.2
P10809_1112
73.3
Naive CD8 T-cell nTPM: 71.8
Samples: 6
Max nTPM: 115.8
Min nTPM: 45.6
P10809_1016
115.8
P10809_1031
64.8
P10809_1050
61.7
P10809_1069
64.9
P10809_1087
45.6
P10809_1110
78.0
T-reg nTPM: 143.7
Samples: 6
Max nTPM: 253.2
Min nTPM: 63.4
P10809_1018
253.2
P10809_1037
219.9
P10809_1056
69.5
P10809_1075
139.7
P10809_1094
63.4
P10809_1106
116.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
97.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 54.4
Samples: 4
Max nTPM: 84.5
Min nTPM: 23.0
RHH5202_R3573
78.6
RHH5230_R3602
23.0
RHH5259_R3631
31.6
RHH5288_R3660
84.5
Effector memory CD8 T-cell nTPM: 97.2
Samples: 4
Max nTPM: 194.5
Min nTPM: 45.4
RHH5203_R3574
194.5
RHH5231_R3603
82.9
RHH5260_R3632
45.4
RHH5289_R3661
65.8
MAIT T-cell nTPM: 38.5
Samples: 4
Max nTPM: 53.4
Min nTPM: 20.8
RHH5233_R3605
49.0
RHH5205_R3576
20.8
RHH5262_R3634
30.7
RHH5297_R3663
53.4
Memory CD4 T-cell TFH nTPM: 63.4
Samples: 4
Max nTPM: 76.1
Min nTPM: 52.0
RHH5300_R3666
54.7
RHH5236_R3608
70.7
RHH5265_R3637
52.0
RHH5208_R3579
76.1
Memory CD4 T-cell Th1 nTPM: 72.3
Samples: 4
Max nTPM: 137.0
Min nTPM: 41.3
RHH5210_R3581
56.4
RHH5302_R3668
137.0
RHH5238_R3610
41.3
RHH5267_R3639
54.4
Memory CD4 T-cell Th1/Th17 nTPM: 22.7
Samples: 4
Max nTPM: 37.0
Min nTPM: 7.3
RHH5303_R3669
37.0
RHH5211_R3582
25.5
RHH5239_R3611
7.3
RHH5268_R3640
21.0
Memory CD4 T-cell Th17 nTPM: 25.8
Samples: 4
Max nTPM: 41.5
Min nTPM: 14.0
RHH5304_R3670
30.5
RHH5212_R3583
41.5
RHH5240_R3612
17.1
RHH5269_R3641
14.0
Memory CD4 T-cell Th2 nTPM: 32.1
Samples: 4
Max nTPM: 41.6
Min nTPM: 23.3
RHH5305_R3671
33.8
RHH5213_R3584
23.3
RHH5241_R3613
41.6
RHH5270_R3642
29.8
Naive CD4 T-cell nTPM: 70.4
Samples: 4
Max nTPM: 97.7
Min nTPM: 47.7
RHH5306_R3672
97.7
RHH5214_R3585
81.8
RHH5242_R3614
47.7
RHH5271_R3643
54.2
Naive CD8 T-cell nTPM: 65.7
Samples: 4
Max nTPM: 94.8
Min nTPM: 26.0
RHH5201_R3572
71.2
RHH5229_R3601
26.0
RHH5258_R3630
94.8
RHH5287_R3659
70.8
Non-Vd2 gdTCR nTPM: 70.3
Samples: 4
Max nTPM: 98.7
Min nTPM: 37.2
RHH5235_R3607
37.2
RHH5264_R3636
65.2
RHH5207_R3578
80.1
RHH5299_R3665
98.7
T-reg nTPM: 86.6
Samples: 4
Max nTPM: 132.2
Min nTPM: 57.8
RHH5301_R3667
132.2
RHH5237_R3609
93.6
RHH5266_R3638
62.6
RHH5209_R3580
57.8
Terminal effector memory CD4 T-cell nTPM: 46.7
Samples: 2
Max nTPM: 59.4
Min nTPM: 33.9
RHH5243_R3615
33.9
RHH5272_R3644
59.4
Terminal effector memory CD8 T-cell nTPM: 74.9
Samples: 4
Max nTPM: 97.9
Min nTPM: 43.5
RHH5232_R3604
66.6
RHH5204_R3575
97.9
RHH5261_R3633
43.5
RHH5296_R3662
91.5
Vd2 gdTCR nTPM: 57.7
Samples: 4
Max nTPM: 91.4
Min nTPM: 32.0
RHH5234_R3606
35.0
RHH5206_R3577
91.4
RHH5263_R3635
32.0
RHH5298_R3664
72.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
