HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:53.8 nTPM
HPA Brain:59.6 nTPM
GTEx:53.8 nTPM
FANTOM5:31.9 Scaled Tags Per Million
Pig:19.9 nTPM
Mouse:58.1 nTPM
Allen mouse:6.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA027124Antibody HPA027130
Glial cells Not detectedNot detected
Neuronal cells LowNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 59.6
Sample id Sample description nTPM
Hippocampus
nTPM: 51.8
2148 Female, age 91, left hemisphere 57.5
1898 Male, age 80, left hemisphere 56.8
2621 Female, age 67, right hemisphere 53.7
1855 Male, age 76, left hemisphere 49.0
1911 Female, age 85, right hemisphere 49.0
2529 Female, age 94, left hemisphere 44.8
Dentate gyrus
nTPM: 51.9
1927 Female, age 91, both hemispheres 57.2
2531 Female, age 67, both hemispheres 54.1
2010 Male, age 76, both hemispheres 50.4
2528 Male, age 74, both hemispheres 50.0
2530 Female, age 94, left hemisphere 50.0
2246 Female, age 85, both hemispheres 49.9
Entorhinal gyrus
nTPM: 52.1
2764 Male, age 80, right hemisphere 57.1
2613 Female, age 94, left hemisphere 53.9
1938 Female, age 85, left hemisphere 53.8
2686 Male, age 75, right hemisphere 53.3
1787 Male, age 76, left hemisphere 48.9
2117 Female, age 91, right hemisphere 45.5
Hippocampus, CA1
nTPM: 53.3
2749 Male, age 80, left hemisphere 65.0
1873 Female, age 85, both hemispheres 52.9
2527 Male, age 74, both hemispheres 50.4
2045 Male, age 76, both hemispheres 49.7
2082 Female, age 91, right hemisphere 48.7
Hippocampus, CA2
nTPM: 52.6
1963 Male, age 80, left hemisphere 64.1
1892 Male, age 76, both hemispheres 56.0
2437 Female, age 94, left hemisphere 53.9
2249 Male, age 74, both hemispheres 50.8
1940 Female, age 85, left hemisphere 45.8
2113 Female, age 91, right hemisphere 45.3
Hippocampus, CA3
nTPM: 59.6
2436 Male, age 74, both hemispheres 69.2
2620 Female, age 94, left hemisphere 64.0
2137 Male, age 80, left hemisphere 62.1
2861 Female, age 67, both hemispheres 56.2
1867 Male, age 76, both hemispheres 54.2
1891 Female, age 85, both hemispheres 51.8
Parahippocampal cortex
nTPM: 50.7
2622 Female, age 67, right hemisphere 58.3
2692 Male, age 74, both hemispheres 55.3
1850 Male, age 80, both hemispheres 54.5
2245 Female, age 91, both hemispheres 51.0
2693 Female, age 94, both hemispheres 50.5
1933 Female, age 85, both hemispheres 49.6
2532 Female, age 72, left hemisphere 47.6
1990 Female, age 91, right hemisphere 47.4
2250 Female, age 67, right hemisphere 46.8
2018 Male, age 76, both hemispheres 46.2
Perirhinal gyrus
nTPM: 53.3
1847 Female, age 91, left hemisphere 60.9
1794 Male, age 80, right hemisphere 56.7
1841 Female, age 85, right hemisphere 51.8
2848 Male, age 76, right hemisphere 48.8
2521 Female, age 94, right hemisphere 48.5
Subiculum
nTPM: 50.4
2619 Male, age 74, both hemispheres 56.9
2438 Female, age 94, left hemisphere 54.0
2729 Female, age 91, right hemisphere 50.2
1901 Male, age 80, both hemispheres 50.0
1977 Female, age 85, both hemispheres 48.1
2042 Male, age 76, both hemispheres 43.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 53.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 53.8
Samples: 197

Max nTPM: 84.6
Min nTPM: 20.4
Std nTPM: 10.5
Median nTPM: 52.9
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 84.6
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 81.8
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 81.2
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 80.9
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 80.4
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 79.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 78.4
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 74.4
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 73.9
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 73.6
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 73.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 31.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 31.9
FF:10153-102I9 76 years, female 33.7
FF:10169-103B7 60 years, female 30.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 19.9
Pig sample Sample description nTPM
Subiculum
nTPM: 19.0
Samples: 4

Max nTPM: 19.2
Min nTPM: 18.8
Sample A Female 19.2
Sample B Female 18.9
Sample C Male 18.8
Sample D Male 19.1
Dorsal hippocampus
nTPM: 19.9
Samples: 4

Max nTPM: 20.8
Min nTPM: 18.9
Sample A Female 20.8
Sample B Female 20.3
Sample C Male 18.9
Sample D Male 19.6
Entorhinal cortex
nTPM: 18.9
Samples: 4

Max nTPM: 19.6
Min nTPM: 18.2
Sample A Female 19.4
Sample B Female 19.6
Sample C Male 18.2
Sample D Male 18.5
Ventral hippocampus
nTPM: 19.8
Samples: 4

Max nTPM: 20.8
Min nTPM: 18.2
Sample A Female 19.2
Sample B Female 18.2
Sample C Male 20.8
Sample D Male 20.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 58.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 52.3
Samples: 4

Max nTPM: 54.3
Min nTPM: 49.1
Sample A Male 53.6
Sample B Male 52.0
Sample C Female 54.3
Sample D Female 49.1
Hippocampal formation
nTPM: 58.1
Samples: 4

Max nTPM: 59.4
Min nTPM: 56.7
Sample A Male 59.0
Sample B Male 59.4
Sample C Female 56.7
Sample D Female 57.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.6
68193029 Antisense, RP_040825_01_F02, Mouse strain C57BL/6J (56 days, male) 6.6

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