HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:103.0 nTPM
HPA Brain:50.1 nTPM
GTEx:103.0 nTPM
FANTOM5:65.4 Scaled Tags Per Million
Pig:21.0 nTPM
Mouse:90.2 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA026763Antibody HPA028488
Glial cells Not detectedLow
Neuronal cells Not detectedMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 50.1
Sample id Sample description nTPM
Hippocampus
nTPM: 44.3
1898 Male, age 80, left hemisphere 56.1
2529 Female, age 94, left hemisphere 47.4
1911 Female, age 85, right hemisphere 44.5
2148 Female, age 91, left hemisphere 40.5
2621 Female, age 67, right hemisphere 40.3
1855 Male, age 76, left hemisphere 37.1
Dentate gyrus
nTPM: 38.2
2530 Female, age 94, left hemisphere 48.8
2010 Male, age 76, both hemispheres 44.2
1927 Female, age 91, both hemispheres 36.1
2528 Male, age 74, both hemispheres 35.9
2531 Female, age 67, both hemispheres 33.3
2246 Female, age 85, both hemispheres 30.7
Entorhinal gyrus
nTPM: 47.8
2117 Female, age 91, right hemisphere 65.4
2764 Male, age 80, right hemisphere 56.6
1938 Female, age 85, left hemisphere 48.3
1787 Male, age 76, left hemisphere 40.2
2613 Female, age 94, left hemisphere 39.5
2686 Male, age 75, right hemisphere 36.7
Hippocampus, CA1
nTPM: 37.4
1873 Female, age 85, both hemispheres 41.8
2749 Male, age 80, left hemisphere 41.0
2045 Male, age 76, both hemispheres 38.2
2527 Male, age 74, both hemispheres 37.2
2082 Female, age 91, right hemisphere 28.9
Hippocampus, CA2
nTPM: 42.2
2249 Male, age 74, both hemispheres 53.7
1963 Male, age 80, left hemisphere 48.9
2437 Female, age 94, left hemisphere 42.3
1940 Female, age 85, left hemisphere 41.3
1892 Male, age 76, both hemispheres 38.2
2113 Female, age 91, right hemisphere 29.0
Hippocampus, CA3
nTPM: 36.5
1891 Female, age 85, both hemispheres 50.5
1867 Male, age 76, both hemispheres 48.0
2436 Male, age 74, both hemispheres 33.9
2620 Female, age 94, left hemisphere 32.1
2861 Female, age 67, both hemispheres 27.5
2137 Male, age 80, left hemisphere 26.8
Parahippocampal cortex
nTPM: 36.8
1990 Female, age 91, right hemisphere 47.2
2018 Male, age 76, both hemispheres 46.6
1850 Male, age 80, both hemispheres 41.4
2532 Female, age 72, left hemisphere 40.9
1933 Female, age 85, both hemispheres 40.0
2245 Female, age 91, both hemispheres 34.0
2692 Male, age 74, both hemispheres 34.0
2250 Female, age 67, right hemisphere 28.3
2693 Female, age 94, both hemispheres 27.9
2622 Female, age 67, right hemisphere 27.1
Perirhinal gyrus
nTPM: 36.3
1847 Female, age 91, left hemisphere 40.3
1794 Male, age 80, right hemisphere 36.8
1841 Female, age 85, right hemisphere 35.9
2521 Female, age 94, right hemisphere 35.0
2848 Male, age 76, right hemisphere 33.8
Subiculum
nTPM: 50.1
1901 Male, age 80, both hemispheres 59.5
2042 Male, age 76, both hemispheres 54.5
1977 Female, age 85, both hemispheres 52.3
2729 Female, age 91, right hemisphere 46.8
2438 Female, age 94, left hemisphere 46.1
2619 Male, age 74, both hemispheres 41.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 103.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 103.0
Samples: 197

Max nTPM: 302.9
Min nTPM: 34.4
Std nTPM: 37.9
Median nTPM: 97.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 302.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 259.6
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 246.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 187.0
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 178.8
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 177.2
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 175.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 172.1
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 167.9
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 166.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 164.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 65.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 65.4
FF:10169-103B7 60 years, female 69.5
FF:10153-102I9 76 years, female 61.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 21.0
Pig sample Sample description nTPM
Subiculum
nTPM: 18.2
Samples: 4

Max nTPM: 21.8
Min nTPM: 16.1
Sample A Female 21.8
Sample B Female 18.4
Sample C Male 16.6
Sample D Male 16.1
Dorsal hippocampus
nTPM: 21.0
Samples: 4

Max nTPM: 28.3
Min nTPM: 12.6
Sample A Female 28.3
Sample B Female 18.5
Sample C Male 24.4
Sample D Male 12.6
Entorhinal cortex
nTPM: 17.3
Samples: 4

Max nTPM: 20.0
Min nTPM: 13.0
Sample A Female 17.1
Sample B Female 20.0
Sample C Male 19.0
Sample D Male 13.0
Ventral hippocampus
nTPM: 20.6
Samples: 4

Max nTPM: 22.9
Min nTPM: 18.6
Sample A Female 22.3
Sample B Female 18.7
Sample C Male 22.9
Sample D Male 18.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 90.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 90.2
Samples: 4

Max nTPM: 97.7
Min nTPM: 86.3
Sample A Male 97.7
Sample B Male 89.5
Sample C Female 87.2
Sample D Female 86.3
Hippocampal formation
nTPM: 82.8
Samples: 4

Max nTPM: 87.2
Min nTPM: 76.4
Sample A Male 87.2
Sample B Male 76.4
Sample C Female 85.3
Sample D Female 82.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
71763972 Antisense, RP_050921_02_H09, Mouse strain C57BL/6J (56 days, male) 0.2
74272919 Antisense, RP_050921_02_H09, Mouse strain C57BL/6J (56 days, male) 0.1

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