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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
305.0
nTPM
Monaco:
310.6
nTPM
Schmiedel:
156.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
305.0
HPA sample
nTPM
gdT-cell nTPM: 280.4
Samples: 6
Max nTPM: 323.2
Min nTPM: 218.2
P10809_1007
218.2
P10809_1022
323.2
P10809_1041
319.7
P10809_1060
262.1
P10809_1077
288.0
P10809_1098
271.0
MAIT T-cell nTPM: 305.0
Samples: 6
Max nTPM: 385.4
Min nTPM: 229.0
P10809_1006
229.0
P10809_1024
385.4
P10809_1043
305.1
P10809_1062
326.4
P10809_1083
314.9
P10809_1097
269.3
Memory CD4 T-cell nTPM: 253.7
Samples: 6
Max nTPM: 293.7
Min nTPM: 197.2
P10809_1014
197.2
P10809_1026
249.1
P10809_1045
272.8
P10809_1064
277.0
P10809_1086
293.7
P10809_1113
232.3
Memory CD8 T-cell nTPM: 257.4
Samples: 5
Max nTPM: 292.1
Min nTPM: 218.6
P10809_1012
218.6
P10809_1027
225.3
P10809_1046
284.8
P10809_1065
292.1
P10809_1111
266.4
Naive CD4 T-cell nTPM: 288.4
Samples: 6
Max nTPM: 398.9
Min nTPM: 197.1
P10809_1015
197.1
P10809_1030
280.8
P10809_1049
398.9
P10809_1068
305.2
P10809_1085
291.8
P10809_1112
256.6
Naive CD8 T-cell nTPM: 283.6
Samples: 6
Max nTPM: 351.0
Min nTPM: 196.4
P10809_1016
196.4
P10809_1031
302.8
P10809_1050
286.4
P10809_1069
334.4
P10809_1087
351.0
P10809_1110
230.3
T-reg nTPM: 256.3
Samples: 6
Max nTPM: 324.3
Min nTPM: 174.9
P10809_1018
174.9
P10809_1037
275.7
P10809_1056
243.9
P10809_1075
250.7
P10809_1094
324.3
P10809_1106
268.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
310.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 205.7
Samples: 4
Max nTPM: 246.6
Min nTPM: 179.4
RHH5202_R3573
209.4
RHH5230_R3602
246.6
RHH5259_R3631
179.4
RHH5288_R3660
187.4
Effector memory CD8 T-cell nTPM: 282.0
Samples: 4
Max nTPM: 317.8
Min nTPM: 258.0
RHH5203_R3574
281.7
RHH5231_R3603
317.8
RHH5260_R3632
258.0
RHH5289_R3661
270.6
MAIT T-cell nTPM: 277.6
Samples: 4
Max nTPM: 352.4
Min nTPM: 226.5
RHH5233_R3605
296.7
RHH5205_R3576
234.6
RHH5262_R3634
352.4
RHH5297_R3663
226.5
Memory CD4 T-cell TFH nTPM: 236.4
Samples: 4
Max nTPM: 276.9
Min nTPM: 177.6
RHH5300_R3666
216.5
RHH5236_R3608
276.9
RHH5265_R3637
274.6
RHH5208_R3579
177.6
Memory CD4 T-cell Th1 nTPM: 198.3
Samples: 4
Max nTPM: 227.9
Min nTPM: 160.0
RHH5210_R3581
178.3
RHH5302_R3668
227.9
RHH5238_R3610
160.0
RHH5267_R3639
227.0
Memory CD4 T-cell Th1/Th17 nTPM: 220.6
Samples: 4
Max nTPM: 270.0
Min nTPM: 136.4
RHH5303_R3669
270.0
RHH5211_R3582
257.5
RHH5239_R3611
136.4
RHH5268_R3640
218.4
Memory CD4 T-cell Th17 nTPM: 205.2
Samples: 4
Max nTPM: 231.7
Min nTPM: 165.9
RHH5304_R3670
211.0
RHH5212_R3583
165.9
RHH5240_R3612
231.7
RHH5269_R3641
212.3
Memory CD4 T-cell Th2 nTPM: 226.2
Samples: 4
Max nTPM: 260.2
Min nTPM: 195.2
RHH5305_R3671
195.2
RHH5213_R3584
221.7
RHH5241_R3613
227.6
RHH5270_R3642
260.2
Naive CD4 T-cell nTPM: 234.9
Samples: 4
Max nTPM: 267.5
Min nTPM: 202.1
RHH5306_R3672
213.0
RHH5214_R3585
202.1
RHH5242_R3614
257.1
RHH5271_R3643
267.5
Naive CD8 T-cell nTPM: 221.7
Samples: 4
Max nTPM: 294.3
Min nTPM: 101.3
RHH5201_R3572
256.6
RHH5229_R3601
101.3
RHH5258_R3630
294.3
RHH5287_R3659
234.6
Non-Vd2 gdTCR nTPM: 297.3
Samples: 4
Max nTPM: 344.4
Min nTPM: 250.0
RHH5235_R3607
277.7
RHH5264_R3636
344.4
RHH5207_R3578
317.2
RHH5299_R3665
250.0
T-reg nTPM: 219.0
Samples: 4
Max nTPM: 237.7
Min nTPM: 194.7
RHH5301_R3667
194.7
RHH5237_R3609
237.7
RHH5266_R3638
231.0
RHH5209_R3580
212.5
Terminal effector memory CD4 T-cell nTPM: 310.6
Samples: 2
Max nTPM: 345.6
Min nTPM: 275.6
RHH5243_R3615
275.6
RHH5272_R3644
345.6
Terminal effector memory CD8 T-cell nTPM: 303.5
Samples: 4
Max nTPM: 360.8
Min nTPM: 266.0
RHH5232_R3604
360.8
RHH5204_R3575
297.7
RHH5261_R3633
266.0
RHH5296_R3662
289.5
Vd2 gdTCR nTPM: 281.5
Samples: 4
Max nTPM: 347.1
Min nTPM: 198.7
RHH5234_R3606
347.1
RHH5206_R3577
278.2
RHH5263_R3635
301.9
RHH5298_R3664
198.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.