HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:22.7 nTPM
HPA Brain:26.8 nTPM
GTEx:22.7 nTPM
FANTOM5:27.0 Scaled Tags Per Million
Pig:39.4 nTPM
Mouse:55.2 nTPM
Allen mouse:1.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA037909
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 26.8
Sample id Sample description nTPM
Hippocampus
nTPM: 23.6
2148 Female, age 91, left hemisphere 25.1
1898 Male, age 80, left hemisphere 24.7
2529 Female, age 94, left hemisphere 24.7
1855 Male, age 76, left hemisphere 22.9
2621 Female, age 67, right hemisphere 22.4
1911 Female, age 85, right hemisphere 21.6
Dentate gyrus
nTPM: 25.3
2010 Male, age 76, both hemispheres 27.9
2528 Male, age 74, both hemispheres 26.3
2246 Female, age 85, both hemispheres 25.3
2531 Female, age 67, both hemispheres 24.6
2530 Female, age 94, left hemisphere 23.9
1927 Female, age 91, both hemispheres 23.7
Entorhinal gyrus
nTPM: 25.1
2686 Male, age 75, right hemisphere 27.0
2764 Male, age 80, right hemisphere 26.1
1938 Female, age 85, left hemisphere 25.3
2117 Female, age 91, right hemisphere 24.5
1787 Male, age 76, left hemisphere 24.1
2613 Female, age 94, left hemisphere 23.5
Hippocampus, CA1
nTPM: 23.9
2082 Female, age 91, right hemisphere 27.2
1873 Female, age 85, both hemispheres 25.7
2527 Male, age 74, both hemispheres 23.0
2749 Male, age 80, left hemisphere 22.2
2045 Male, age 76, both hemispheres 21.4
Hippocampus, CA2
nTPM: 26.5
2249 Male, age 74, both hemispheres 32.2
1940 Female, age 85, left hemisphere 28.5
2113 Female, age 91, right hemisphere 25.8
2437 Female, age 94, left hemisphere 25.2
1963 Male, age 80, left hemisphere 24.1
1892 Male, age 76, both hemispheres 23.4
Hippocampus, CA3
nTPM: 24.8
2436 Male, age 74, both hemispheres 29.1
2620 Female, age 94, left hemisphere 26.4
1867 Male, age 76, both hemispheres 23.9
1891 Female, age 85, both hemispheres 23.7
2861 Female, age 67, both hemispheres 23.2
2137 Male, age 80, left hemisphere 22.7
Parahippocampal cortex
nTPM: 24.8
1850 Male, age 80, both hemispheres 30.8
1990 Female, age 91, right hemisphere 27.3
2018 Male, age 76, both hemispheres 25.4
1933 Female, age 85, both hemispheres 25.3
2532 Female, age 72, left hemisphere 24.7
2692 Male, age 74, both hemispheres 24.3
2250 Female, age 67, right hemisphere 23.7
2245 Female, age 91, both hemispheres 22.9
2622 Female, age 67, right hemisphere 22.4
2693 Female, age 94, both hemispheres 21.4
Perirhinal gyrus
nTPM: 26.8
1794 Male, age 80, right hemisphere 28.5
1841 Female, age 85, right hemisphere 28.4
2848 Male, age 76, right hemisphere 27.1
1847 Female, age 91, left hemisphere 26.1
2521 Female, age 94, right hemisphere 23.8
Subiculum
nTPM: 24.4
2438 Female, age 94, left hemisphere 26.2
1977 Female, age 85, both hemispheres 25.0
2729 Female, age 91, right hemisphere 25.0
2619 Male, age 74, both hemispheres 24.2
2042 Male, age 76, both hemispheres 23.5
1901 Male, age 80, both hemispheres 22.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 22.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.7
Samples: 197

Max nTPM: 61.3
Min nTPM: 10.9
Std nTPM: 7.1
Median nTPM: 21.4
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 61.3
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 56.7
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 47.9
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 46.7
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 45.3
GTEX-14E7W-0011-R1b-SM-5YYAT 70-79 years, male 45.0
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 41.9
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 37.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 37.5
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 36.6
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 35.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 27.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 27.0
FF:10153-102I9 76 years, female 32.2
FF:10169-103B7 60 years, female 21.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 39.4
Pig sample Sample description nTPM
Subiculum
nTPM: 33.0
Samples: 4

Max nTPM: 38.6
Min nTPM: 28.0
Sample A Female 38.6
Sample B Female 30.8
Sample C Male 28.0
Sample D Male 34.5
Dorsal hippocampus
nTPM: 39.4
Samples: 4

Max nTPM: 47.7
Min nTPM: 30.0
Sample A Female 47.7
Sample B Female 35.0
Sample C Male 44.7
Sample D Male 30.0
Entorhinal cortex
nTPM: 27.9
Samples: 4

Max nTPM: 29.5
Min nTPM: 24.3
Sample A Female 29.2
Sample B Female 29.5
Sample C Male 28.6
Sample D Male 24.3
Ventral hippocampus
nTPM: 36.1
Samples: 4

Max nTPM: 41.9
Min nTPM: 28.2
Sample A Female 37.6
Sample B Female 28.2
Sample C Male 41.9
Sample D Male 36.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 55.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 55.2
Samples: 4

Max nTPM: 55.9
Min nTPM: 54.1
Sample A Male 55.9
Sample B Male 54.1
Sample C Female 55.6
Sample D Female 55.2
Hippocampal formation
nTPM: 53.9
Samples: 4

Max nTPM: 55.8
Min nTPM: 51.2
Sample A Male 51.2
Sample B Male 53.4
Sample C Female 55.0
Sample D Female 55.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.6
74357609 Antisense, RP_060119_03_A11, Mouse strain C57BL/6J (56 days, male) 1.6

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