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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
264.8
nTPM
FANTOM5:
734.2
Scaled Tags Per Million
Pig:
311.8
nTPM
Allen mouse:
5.9
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
264.8
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 234.2
2090
Male, age 80, both hemispheres
289.6
2188
Female, age 91, both hemispheres
264.0
1984
Male, age 76, both hemispheres
196.1
2301
Female, age 85, both hemispheres
187.0
Dorsal cochlear nucleus nTPM: 233.0
2802
Male, age 74, right hemisphere
272.8
2187
Female, age 91, both hemispheres
248.3
2370
Male, age 61, both hemispheres
242.3
2378
Male, age 80, both hemispheres
223.3
2058
Male, age 76, both hemispheres
178.2
Dorsal tegmental nucleus nTPM: 244.0
2083
Male, age 80, both hemispheres
274.9
2326
Male, age 74, both hemispheres
259.7
2358
Male, age 61, both hemispheres
230.2
1936
Male, age 76, left hemisphere
211.0
Dorsolateral tegmental area nTPM: 228.8
2654
Male, age 80, both hemispheres
295.4
2751
Female, age 85, both hemispheres
230.4
2337
Male, age 61, both hemispheres
229.4
2360
Male, age 74, both hemispheres
209.7
2141
Male, age 76, both hemispheres
178.9
Kolliker-Fuse nucleus nTPM: 227.7
2315
Male, age 76, right hemisphere
269.8
2793
Female, age 91, left hemisphere
216.0
2163
Male, age 80, both hemispheres
197.1
Lateral lemniscal nuclei nTPM: 172.5
2169
Male, age 76, both hemispheres
182.7
2453
Male, age 74, right hemisphere
175.3
2746
Female, age 85, left hemisphere
174.2
2036
Male, age 80, both hemispheres
165.5
2320
Female, age 91, left hemisphere
164.7
Lateral parabrachial nucleus nTPM: 230.0
2792
Male, age 76, both hemispheres
270.6
2013
Male, age 80, both hemispheres
235.3
2139
Female, age 85, right hemisphere
212.0
2790
Male, age 61, both hemispheres
202.0
Lateral vestibular nucleus nTPM: 201.6
2311
Male, age 80, both hemispheres
238.4
2184
Male, age 76, both hemispheres
164.8
Locus coeruleus nTPM: 193.4
2720
Male, age 74, both hemispheres
230.1
2123
Female, age 91, both hemispheres
210.0
2162
Male, age 80, both hemispheres
198.2
2317
Female, age 72, unknown
189.5
2014
Male, age 55, unknown
186.5
2788
Male, age 74, unknown
181.1
1980
Male, age 76, both hemispheres
158.7
Medial parabrachial nucleus nTPM: 218.4
2170
Female, age 91, both hemispheres
283.2
2854
Male, age 80, both hemispheres
226.1
2463
Female, age 85, right hemisphere
205.1
2786
Male, age 76, both hemispheres
195.6
2156
Male, age 61, both hemispheres
182.0
Medial periolivary nuclei nTPM: 200.8
2063
Male, age 76, both hemispheres
238.0
2081
Male, age 80, both hemispheres
210.5
2458
Female, age 91, both hemispheres
203.4
2791
Male, age 74, right hemisphere
192.4
2171
Female, age 85, both hemispheres
159.6
Motor facial nucleus nTPM: 196.9
2126
Male, age 61, both hemispheres
248.9
2062
Male, age 76, both hemispheres
201.8
2365
Male, age 74, right hemisphere
201.7
2795
Female, age 91, both hemispheres
199.9
2697
Female, age 85, both hemispheres
194.8
2327
Male, age 80, both hemispheres
134.6
Motor trigeminal nucleus nTPM: 194.8
2335
Male, age 61, both hemispheres
221.7
2309
Male, age 76, both hemispheres
204.5
2560
Male, age 74, both hemispheres
195.7
2321
Female, age 91, both hemispheres
190.8
2079
Male, age 80, both hemispheres
161.3
Nuclei of the trapezoid body nTPM: 188.4
1983
Male, age 76, both hemispheres
234.5
2166
Male, age 80, both hemispheres
199.6
2159
Male, age 61, both hemispheres
180.2
2368
Female, age 91, both hemispheres
173.4
2735
Female, age 85, both hemispheres
154.2
Nucleus raphe magnus nTPM: 172.4
2051
Male, age 76, both hemispheres
202.1
2459
Female, age 91, both hemispheres
182.3
2455
Male, age 74, both hemispheres
175.7
2328
Male, age 80, both hemispheres
167.3
2160
Male, age 61, both hemispheres
162.5
2172
Female, age 85, both hemispheres
144.7
Paramedian reticular nucleus nTPM: 219.9
2052
Male, age 76, both hemispheres
248.8
2057
Male, age 80, both hemispheres
215.6
2313
Male, age 61, both hemispheres
209.8
2050
Female, age 85, both hemispheres
205.2
Pedunculopontine tegmental nucleus nTPM: 214.9
2338
Male, age 61, both hemispheres
246.5
2334
Male, age 80, both hemispheres
221.6
1921
Female, age 85, both hemispheres
176.4
Pontine nuclei nTPM: 200.2
2319
Female, age 91, both hemispheres
215.8
2115
Male, age 80, left hemisphere
213.6
1863
Male, age 55, unknown
212.5
2454
Male, age 74, left hemisphere
211.6
1968
Male, age 76, left hemisphere
210.9
2109
Female, age 72, unknown
207.5
2787
Female, age 85, both hemispheres
168.9
2727
Male, age 61, right hemisphere
160.7
Pontine raphe nucleus nTPM: 186.1
2122
Female, age 85, midline
191.7
2853
Male, age 76, midline
180.5
Posteroventral cochlear nucleus nTPM: 264.8
2341
Male, age 80, both hemispheres
340.3
2135
Female, age 91, both hemispheres
299.7
2371
Male, age 61, both hemispheres
250.9
2070
Male, age 76, both hemispheres
229.2
2752
Female, age 85, both hemispheres
203.7
Principal sensory trigeminal nucleus nTPM: 180.3
2158
Male, age 61, both hemispheres
187.9
2324
Male, age 76, both hemispheres
182.9
2367
Female, age 91, left hemisphere
180.9
2008
Male, age 80, left hemisphere
169.5
Reticular pontine nucleus, caudal nTPM: 212.4
2457
Female, age 91, both hemispheres
246.1
2559
Male, age 74, both hemispheres
232.0
2092
Male, age 76, both hemispheres
228.3
2332
Male, age 80, right hemisphere
143.2
Reticular pontine nucleus, oral nTPM: 214.0
2366
Female, age 91, both hemispheres
231.5
1939
Male, age 80, both hemispheres
221.3
2167
Male, age 76, both hemispheres
216.9
2361
Male, age 74, both hemispheres
214.9
2012
Female, age 85, both hemispheres
185.3
Reticulotegmental nucleus nTPM: 192.8
2452
Male, age 74, both hemispheres
226.6
2322
Female, age 91, both hemispheres
204.7
2333
Male, age 80, both hemispheres
174.3
2325
Male, age 76, both hemispheres
165.5
Spinal trigeminal nucleus, oral nTPM: 190.6
1978
Male, age 76, both hemispheres
200.9
2164
Male, age 80, both hemispheres
196.1
2737
Female, age 85, both hemispheres
174.8
Subcoeruleus area nTPM: 214.4
2451
Male, age 74, both hemispheres
267.6
2369
Female, age 85, left hemisphere
241.2
1958
Male, age 80, both hemispheres
206.6
2089
Male, age 76, left hemisphere
180.4
2323
Female, age 91, left hemisphere
176.2
Superior olive nTPM: 193.2
2020
Male, age 76, both hemispheres
242.8
2364
Male, age 74, right hemisphere
209.0
1875
Female, age 85, both hemispheres
182.0
2561
Female, age 91, both hemispheres
171.5
2329
Male, age 80, right hemisphere
160.8
Ventral periolivary nuclei nTPM: 187.8
2023
Male, age 76, both hemispheres
241.6
2165
Male, age 80, both hemispheres
181.2
2794
Female, age 91, left hemisphere
173.8
2130
Female, age 85, both hemispheres
154.5
Ventrolateral tegmental area, A5 NE cell group nTPM: 193.2
2359
Male, age 61, both hemispheres
206.7
2161
Male, age 80, both hemispheres
203.2
2840
Female, age 85, both hemispheres
191.5
2456
Female, age 91, both hemispheres
189.6
1959
Male, age 76, both hemispheres
189.4
2449
Male, age 74, both hemispheres
178.7
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
311.8
Pig sample
Sample description
nTPM
Pons nTPM: 311.9
Samples: 4
Max nTPM: 374.4
Min nTPM: 216.9
Sample A
Female
325.3
Sample B
Female
216.9
Sample C
Male
374.4
Sample D
Male
330.8
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
