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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
4522.2
nTPM
Monaco:
623.7
nTPM
Schmiedel:
1568.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
4522.2
HPA sample
nTPM
gdT-cell nTPM: 1982.1
Samples: 6
Max nTPM: 2294.6
Min nTPM: 1454.7
P10809_1007
2266.8
P10809_1022
1642.0
P10809_1041
2244.9
P10809_1060
1454.7
P10809_1077
1989.4
P10809_1098
2294.6
MAIT T-cell nTPM: 3227.9
Samples: 6
Max nTPM: 3912.0
Min nTPM: 2786.3
P10809_1006
3008.3
P10809_1024
3402.1
P10809_1043
3085.5
P10809_1062
3172.9
P10809_1083
2786.3
P10809_1097
3912.0
Memory CD4 T-cell nTPM: 3667.1
Samples: 6
Max nTPM: 4261.0
Min nTPM: 2802.4
P10809_1014
4203.1
P10809_1026
4261.0
P10809_1045
3551.6
P10809_1064
2802.4
P10809_1086
3100.1
P10809_1113
4084.1
Memory CD8 T-cell nTPM: 2785.8
Samples: 5
Max nTPM: 3060.0
Min nTPM: 2287.3
P10809_1012
3060.0
P10809_1027
2975.3
P10809_1046
2612.1
P10809_1065
2287.3
P10809_1111
2994.2
Naive CD4 T-cell nTPM: 4522.2
Samples: 6
Max nTPM: 5409.7
Min nTPM: 3420.1
P10809_1015
5257.7
P10809_1030
5409.7
P10809_1049
3420.1
P10809_1068
4586.2
P10809_1085
3891.7
P10809_1112
4567.8
Naive CD8 T-cell nTPM: 3674.9
Samples: 6
Max nTPM: 5577.4
Min nTPM: 2409.9
P10809_1016
5577.4
P10809_1031
3994.7
P10809_1050
3213.3
P10809_1069
3059.2
P10809_1087
2409.9
P10809_1110
3794.7
T-reg nTPM: 2622.7
Samples: 6
Max nTPM: 2841.2
Min nTPM: 2363.0
P10809_1018
2363.0
P10809_1037
2798.7
P10809_1056
2443.6
P10809_1075
2480.0
P10809_1094
2841.2
P10809_1106
2809.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
623.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 445.7
Samples: 4
Max nTPM: 692.9
Min nTPM: 237.4
RHH5202_R3573
237.4
RHH5230_R3602
545.8
RHH5259_R3631
692.9
RHH5288_R3660
306.6
Effector memory CD8 T-cell nTPM: 201.4
Samples: 4
Max nTPM: 377.4
Min nTPM: 124.4
RHH5203_R3574
138.6
RHH5231_R3603
165.2
RHH5260_R3632
377.4
RHH5289_R3661
124.4
MAIT T-cell nTPM: 365.4
Samples: 4
Max nTPM: 441.2
Min nTPM: 234.7
RHH5233_R3605
234.7
RHH5205_R3576
441.2
RHH5262_R3634
441.2
RHH5297_R3663
344.3
Memory CD4 T-cell TFH nTPM: 286.0
Samples: 4
Max nTPM: 322.7
Min nTPM: 261.3
RHH5300_R3666
261.3
RHH5236_R3608
322.7
RHH5265_R3637
296.4
RHH5208_R3579
263.4
Memory CD4 T-cell Th1 nTPM: 555.6
Samples: 4
Max nTPM: 917.8
Min nTPM: 222.2
RHH5210_R3581
222.2
RHH5302_R3668
459.9
RHH5238_R3610
917.8
RHH5267_R3639
622.3
Memory CD4 T-cell Th1/Th17 nTPM: 462.6
Samples: 4
Max nTPM: 668.4
Min nTPM: 255.9
RHH5303_R3669
320.8
RHH5211_R3582
255.9
RHH5239_R3611
605.3
RHH5268_R3640
668.4
Memory CD4 T-cell Th17 nTPM: 480.2
Samples: 4
Max nTPM: 662.3
Min nTPM: 290.3
RHH5304_R3670
662.3
RHH5212_R3583
290.3
RHH5240_R3612
505.0
RHH5269_R3641
463.3
Memory CD4 T-cell Th2 nTPM: 464.3
Samples: 4
Max nTPM: 701.1
Min nTPM: 334.2
RHH5305_R3671
701.1
RHH5213_R3584
371.5
RHH5241_R3613
334.2
RHH5270_R3642
450.5
Naive CD4 T-cell nTPM: 623.7
Samples: 4
Max nTPM: 706.7
Min nTPM: 451.2
RHH5306_R3672
706.7
RHH5214_R3585
647.5
RHH5242_R3614
451.2
RHH5271_R3643
689.5
Naive CD8 T-cell nTPM: 593.9
Samples: 4
Max nTPM: 989.8
Min nTPM: 309.8
RHH5201_R3572
309.8
RHH5229_R3601
989.8
RHH5258_R3630
358.0
RHH5287_R3659
717.9
Non-Vd2 gdTCR nTPM: 235.6
Samples: 4
Max nTPM: 339.4
Min nTPM: 185.4
RHH5235_R3607
339.4
RHH5264_R3636
214.1
RHH5207_R3578
185.4
RHH5299_R3665
203.6
T-reg nTPM: 381.6
Samples: 4
Max nTPM: 494.7
Min nTPM: 242.4
RHH5301_R3667
374.3
RHH5237_R3609
242.4
RHH5266_R3638
494.7
RHH5209_R3580
415.1
Terminal effector memory CD4 T-cell nTPM: 289.8
Samples: 2
Max nTPM: 352.7
Min nTPM: 226.8
RHH5243_R3615
352.7
RHH5272_R3644
226.8
Terminal effector memory CD8 T-cell nTPM: 284.7
Samples: 4
Max nTPM: 434.6
Min nTPM: 147.1
RHH5232_R3604
147.1
RHH5204_R3575
387.4
RHH5261_R3633
434.6
RHH5296_R3662
169.7
Vd2 gdTCR nTPM: 497.4
Samples: 4
Max nTPM: 740.5
Min nTPM: 302.2
RHH5234_R3606
302.2
RHH5206_R3577
740.5
RHH5263_R3635
546.8
RHH5298_R3664
400.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.