HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:11.1 nTPM
HPA Brain:17.6 nTPM
GTEx:11.1 nTPM
FANTOM5:11.6 Scaled Tags Per Million
Pig:7.3 nTPM
Mouse:6.3 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047166
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.6
Sample id Sample description nTPM
Hippocampus
nTPM: 16.5
1911 Female, age 85, right hemisphere 18.3
2148 Female, age 91, left hemisphere 16.6
2621 Female, age 67, right hemisphere 16.2
1855 Male, age 76, left hemisphere 16.1
2529 Female, age 94, left hemisphere 16.0
1898 Male, age 80, left hemisphere 15.7
Dentate gyrus
nTPM: 16.2
2528 Male, age 74, both hemispheres 17.0
2010 Male, age 76, both hemispheres 16.9
1927 Female, age 91, both hemispheres 16.4
2246 Female, age 85, both hemispheres 16.2
2530 Female, age 94, left hemisphere 15.7
2531 Female, age 67, both hemispheres 14.7
Entorhinal gyrus
nTPM: 13.7
2117 Female, age 91, right hemisphere 16.3
1938 Female, age 85, left hemisphere 14.0
1787 Male, age 76, left hemisphere 13.3
2613 Female, age 94, left hemisphere 13.1
2686 Male, age 75, right hemisphere 12.9
2764 Male, age 80, right hemisphere 12.9
Hippocampus, CA1
nTPM: 16.2
1873 Female, age 85, both hemispheres 17.5
2527 Male, age 74, both hemispheres 17.4
2082 Female, age 91, right hemisphere 16.4
2045 Male, age 76, both hemispheres 15.4
2749 Male, age 80, left hemisphere 14.3
Hippocampus, CA2
nTPM: 15.9
1963 Male, age 80, left hemisphere 17.4
2249 Male, age 74, both hemispheres 17.0
2113 Female, age 91, right hemisphere 16.1
1940 Female, age 85, left hemisphere 16.0
2437 Female, age 94, left hemisphere 14.7
1892 Male, age 76, both hemispheres 14.4
Hippocampus, CA3
nTPM: 14.6
1891 Female, age 85, both hemispheres 17.7
1867 Male, age 76, both hemispheres 15.0
2436 Male, age 74, both hemispheres 15.0
2137 Male, age 80, left hemisphere 14.3
2861 Female, age 67, both hemispheres 14.1
2620 Female, age 94, left hemisphere 11.5
Parahippocampal cortex
nTPM: 15.7
2018 Male, age 76, both hemispheres 18.6
2692 Male, age 74, both hemispheres 18.4
1850 Male, age 80, both hemispheres 16.1
1933 Female, age 85, both hemispheres 15.5
2250 Female, age 67, right hemisphere 15.5
1990 Female, age 91, right hemisphere 15.1
2245 Female, age 91, both hemispheres 14.8
2693 Female, age 94, both hemispheres 14.8
2532 Female, age 72, left hemisphere 13.9
2622 Female, age 67, right hemisphere 13.9
Perirhinal gyrus
nTPM: 13.6
1847 Female, age 91, left hemisphere 14.3
2521 Female, age 94, right hemisphere 14.2
1794 Male, age 80, right hemisphere 13.6
1841 Female, age 85, right hemisphere 13.0
2848 Male, age 76, right hemisphere 13.0
Subiculum
nTPM: 17.6
2438 Female, age 94, left hemisphere 21.8
2619 Male, age 74, both hemispheres 18.0
2729 Female, age 91, right hemisphere 18.0
2042 Male, age 76, both hemispheres 17.8
1901 Male, age 80, both hemispheres 15.7
1977 Female, age 85, both hemispheres 14.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.1
Samples: 197

Max nTPM: 23.8
Min nTPM: 4.3
Std nTPM: 2.9
Median nTPM: 10.9
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 23.8
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 20.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 20.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 18.1
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 17.5
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 16.6
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 16.5
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 16.1
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 16.0
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 15.9
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 15.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 11.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 11.6
FF:10153-102I9 76 years, female 14.9
FF:10169-103B7 60 years, female 8.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 7.3
Pig sample Sample description nTPM
Subiculum
nTPM: 6.4
Samples: 4

Max nTPM: 8.4
Min nTPM: 5.6
Sample A Female 8.4
Sample B Female 5.7
Sample C Male 6.0
Sample D Male 5.6
Dorsal hippocampus
nTPM: 6.8
Samples: 4

Max nTPM: 8.6
Min nTPM: 6.0
Sample A Female 8.6
Sample B Female 6.5
Sample C Male 6.0
Sample D Male 6.2
Entorhinal cortex
nTPM: 7.3
Samples: 4

Max nTPM: 8.1
Min nTPM: 5.9
Sample A Female 8.1
Sample B Female 7.7
Sample C Male 7.4
Sample D Male 5.9
Ventral hippocampus
nTPM: 6.4
Samples: 4

Max nTPM: 7.1
Min nTPM: 4.8
Sample A Female 7.1
Sample B Female 4.8
Sample C Male 6.9
Sample D Male 6.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 6.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 5.6
Samples: 4

Max nTPM: 6.4
Min nTPM: 4.6
Sample A Male 6.4
Sample B Male 5.5
Sample C Female 5.9
Sample D Female 4.6
Hippocampal formation
nTPM: 6.3
Samples: 4

Max nTPM: 7.2
Min nTPM: 5.5
Sample A Male 7.2
Sample B Male 6.7
Sample C Female 5.5
Sample D Female 5.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
68795405 Antisense, RP_041116_02_H10, Mouse strain C57BL/6J (56 days, male) 0.0

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