We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
322.1
nTPM
Monaco:
238.1
nTPM
Schmiedel:
49.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
322.1
HPA sample
nTPM
gdT-cell nTPM: 287.3
Samples: 6
Max nTPM: 353.4
Min nTPM: 225.0
P10809_1007
225.0
P10809_1022
286.2
P10809_1041
353.4
P10809_1060
235.3
P10809_1077
332.6
P10809_1098
291.0
MAIT T-cell nTPM: 322.1
Samples: 6
Max nTPM: 402.2
Min nTPM: 223.6
P10809_1006
223.6
P10809_1024
402.2
P10809_1043
337.2
P10809_1062
313.5
P10809_1083
326.9
P10809_1097
329.4
Memory CD4 T-cell nTPM: 259.7
Samples: 6
Max nTPM: 342.1
Min nTPM: 196.7
P10809_1014
196.7
P10809_1026
223.3
P10809_1045
256.5
P10809_1064
283.7
P10809_1086
342.1
P10809_1113
255.7
Memory CD8 T-cell nTPM: 274.3
Samples: 5
Max nTPM: 327.6
Min nTPM: 194.0
P10809_1012
194.0
P10809_1027
262.6
P10809_1046
283.7
P10809_1065
327.6
P10809_1111
303.7
Naive CD4 T-cell nTPM: 196.1
Samples: 6
Max nTPM: 261.3
Min nTPM: 143.9
P10809_1015
143.9
P10809_1030
159.4
P10809_1049
249.8
P10809_1068
194.4
P10809_1085
261.3
P10809_1112
167.7
Naive CD8 T-cell nTPM: 235.2
Samples: 6
Max nTPM: 379.5
Min nTPM: 136.4
P10809_1016
136.4
P10809_1031
187.0
P10809_1050
236.4
P10809_1069
290.7
P10809_1087
379.5
P10809_1110
181.3
T-reg nTPM: 278.6
Samples: 6
Max nTPM: 393.3
Min nTPM: 205.0
P10809_1018
205.0
P10809_1037
283.3
P10809_1056
393.3
P10809_1075
249.9
P10809_1094
251.5
P10809_1106
288.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
238.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 145.4
Samples: 4
Max nTPM: 164.1
Min nTPM: 123.1
RHH5202_R3573
148.1
RHH5230_R3602
146.2
RHH5259_R3631
123.1
RHH5288_R3660
164.1
Effector memory CD8 T-cell nTPM: 215.2
Samples: 4
Max nTPM: 241.9
Min nTPM: 172.9
RHH5203_R3574
241.9
RHH5231_R3603
207.2
RHH5260_R3632
172.9
RHH5289_R3661
238.7
MAIT T-cell nTPM: 228.5
Samples: 4
Max nTPM: 254.2
Min nTPM: 169.7
RHH5233_R3605
254.2
RHH5205_R3576
169.7
RHH5262_R3634
250.3
RHH5297_R3663
239.7
Memory CD4 T-cell TFH nTPM: 169.5
Samples: 4
Max nTPM: 192.6
Min nTPM: 157.8
RHH5300_R3666
157.8
RHH5236_R3608
192.6
RHH5265_R3637
159.5
RHH5208_R3579
168.0
Memory CD4 T-cell Th1 nTPM: 139.1
Samples: 4
Max nTPM: 168.1
Min nTPM: 113.8
RHH5210_R3581
133.3
RHH5302_R3668
168.1
RHH5238_R3610
113.8
RHH5267_R3639
141.0
Memory CD4 T-cell Th1/Th17 nTPM: 186.8
Samples: 4
Max nTPM: 253.8
Min nTPM: 103.6
RHH5303_R3669
253.8
RHH5211_R3582
225.7
RHH5239_R3611
103.6
RHH5268_R3640
164.0
Memory CD4 T-cell Th17 nTPM: 153.9
Samples: 4
Max nTPM: 183.3
Min nTPM: 107.6
RHH5304_R3670
183.3
RHH5212_R3583
178.5
RHH5240_R3612
146.1
RHH5269_R3641
107.6
Memory CD4 T-cell Th2 nTPM: 206.4
Samples: 4
Max nTPM: 251.3
Min nTPM: 162.5
RHH5305_R3671
209.3
RHH5213_R3584
202.6
RHH5241_R3613
251.3
RHH5270_R3642
162.5
Naive CD4 T-cell nTPM: 123.1
Samples: 4
Max nTPM: 143.6
Min nTPM: 106.0
RHH5306_R3672
106.0
RHH5214_R3585
136.5
RHH5242_R3614
143.6
RHH5271_R3643
106.3
Naive CD8 T-cell nTPM: 119.3
Samples: 4
Max nTPM: 159.0
Min nTPM: 75.4
RHH5201_R3572
153.9
RHH5229_R3601
75.4
RHH5258_R3630
159.0
RHH5287_R3659
88.9
Non-Vd2 gdTCR nTPM: 226.4
Samples: 4
Max nTPM: 268.8
Min nTPM: 186.8
RHH5235_R3607
186.8
RHH5264_R3636
268.8
RHH5207_R3578
242.7
RHH5299_R3665
207.1
T-reg nTPM: 152.5
Samples: 4
Max nTPM: 211.9
Min nTPM: 112.2
RHH5301_R3667
140.1
RHH5237_R3609
211.9
RHH5266_R3638
112.2
RHH5209_R3580
145.9
Terminal effector memory CD4 T-cell nTPM: 212.2
Samples: 2
Max nTPM: 249.0
Min nTPM: 175.3
RHH5243_R3615
175.3
RHH5272_R3644
249.0
Terminal effector memory CD8 T-cell nTPM: 231.1
Samples: 4
Max nTPM: 262.6
Min nTPM: 187.5
RHH5232_R3604
219.2
RHH5204_R3575
262.6
RHH5261_R3633
187.5
RHH5296_R3662
255.1
Vd2 gdTCR nTPM: 238.2
Samples: 4
Max nTPM: 262.4
Min nTPM: 213.2
RHH5234_R3606
246.1
RHH5206_R3577
262.4
RHH5263_R3635
213.2
RHH5298_R3664
230.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.