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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
171.3
nTPM
GTEx:
171.3
nTPM
FANTOM5:
80.8
Scaled Tags Per Million
Pig:
109.2
nTPM
Mouse:
521.4
nTPM
RETINA - Annotated protein expression
Pending normal tissue analysis
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
171.3
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 171.3
Samples: 105
Max nTPM: 331.7
Min nTPM: 70.3
Std nTPM: 53.0
Median nTPM:
490_1
67 years, female
331.7
415_1
77 years, female
306.5
162_1
79 years, female
296.3
32_1
67 years, male
288.9
126_1
63 years, male
283.9
149_1
88 years, male
275.1
466_1
57 years, female
269.3
43_1
64 years, female
252.8
491_1
89 years, female
246.1
6_1
73 years, female
242.7
81_1
67 years, male
241.7
142_1
61 years, female
241.3
495_1
57 years, female
241.1
414_1
84 years, female
236.3
468_1
89 years, male
234.4
217_1
76 years, male
231.5
153_1
70 years, female
230.7
117_1
61 years, male
225.4
9_1
66 years, female
219.0
266_1
85 years, male
216.2
2_1
77 years, female
212.6
315_1
62 years, female
211.3
89_1
63 years, male
206.3
137_1
83 years, male
205.6
526_1
61 years, male
204.9
18_1
88 years, male
202.9
139_1
64 years, female
201.9
115_1
83 years, male
199.6
35_1
74 years, female
199.4
499_1
55 years, female
197.1
389_1
86 years, female
193.9
246_1
77 years, male
193.4
352_1
62 years, male
192.6
42_1
85 years, male
191.3
324_1
76 years, male
187.6
265_1
87 years, male
187.3
307_1
66 years, female
186.5
251_1
78 years, male
186.2
99_1
64 years, male
183.7
109_1
81 years, female
182.7
145_1
84 years, male
181.7
347_1
72 years, male
176.5
229_1
69 years, female
176.4
120_1
70 years, female
176.1
119_1
70 years, female
175.5
518_1
75 years, female
174.3
17_1
71 years, male
172.9
413_1
59 years, female
171.8
311_1
78 years, male
171.3
254_1
77 years, female
170.9
503_1
68 years, male
169.0
517_1
88 years, male
163.3
447_1
81 years, male
162.6
355_1
70 years, female
159.1
316_1
62 years, male
158.9
425_1
59 years, female
158.8
348_1
84 years, male
157.4
313_1
79 years, female
156.0
292_1
71 years, male
155.0
291_1
76 years, male
154.2
335_1
73 years, female
153.9
480_1
63 years, male
152.5
396_1
62 years, male
152.2
237_1
82 years, male
151.7
354_1
81 years, female
151.0
375_1
74 years, female
150.3
243_1
75 years, male
149.9
286_1
68 years, female
148.6
4_1
88 years, female
148.5
189_1
76 years, male
147.7
405_1
91 years, male
147.6
350_1
84 years, female
142.0
386_1
76 years, male
141.2
288_1
66 years, female
139.2
172_1
72 years, female
136.6
404_1
82 years, female
136.5
377_1
82 years, female
136.0
293_1
68 years, female
133.1
322_1
76 years, male
130.8
321_1
62 years, female
130.4
319_1
81 years, male
129.9
394_1
75 years, female
126.8
349_1
83 years, male
123.9
406_1
79 years, male
123.1
379_1
60 years, male
119.6
353_1
82 years, female
119.4
356_1
87 years, female
118.1
314_1
67 years, male
117.6
318_1
68 years, male
117.5
320_1
89 years, female
117.3
376_1
75 years, female
117.0
308_1
70 years, female
116.2
501_1
88 years, male
115.8
317_1
60 years, male
112.8
384_1
83 years, male
111.6
264_1
73 years, female
104.7
41_1
94 years, female
104.0
351_1
91 years, male
103.3
177_1
74 years, male
100.0
173_1
67 years, male
98.0
218_1
71 years, female
98.0
163_1
78 years, male
92.6
295_1
61 years, female
89.9
506_1
65 years, male
79.2
452_1
88 years, female
70.3
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.