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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
110.7
nTPM
Monaco:
298.0
nTPM
Schmiedel:
205.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
110.7
HPA sample
nTPM
gdT-cell nTPM: 110.7
Samples: 6
Max nTPM: 155.7
Min nTPM: 81.1
P10809_1007
81.2
P10809_1022
81.1
P10809_1041
115.5
P10809_1060
155.7
P10809_1077
121.2
P10809_1098
109.6
MAIT T-cell nTPM: 97.9
Samples: 6
Max nTPM: 118.4
Min nTPM: 59.7
P10809_1006
59.7
P10809_1024
103.3
P10809_1043
97.2
P10809_1062
97.1
P10809_1083
111.5
P10809_1097
118.4
Memory CD4 T-cell nTPM: 77.4
Samples: 6
Max nTPM: 95.5
Min nTPM: 54.0
P10809_1014
54.0
P10809_1026
76.1
P10809_1045
70.0
P10809_1064
92.3
P10809_1086
95.5
P10809_1113
76.5
Memory CD8 T-cell nTPM: 94.6
Samples: 5
Max nTPM: 122.1
Min nTPM: 61.4
P10809_1012
61.4
P10809_1027
102.0
P10809_1046
89.6
P10809_1065
122.1
P10809_1111
97.8
Naive CD4 T-cell nTPM: 90.7
Samples: 6
Max nTPM: 112.0
Min nTPM: 70.6
P10809_1015
70.6
P10809_1030
112.0
P10809_1049
102.2
P10809_1068
90.4
P10809_1085
79.2
P10809_1112
90.0
Naive CD8 T-cell nTPM: 109.1
Samples: 6
Max nTPM: 127.2
Min nTPM: 80.3
P10809_1016
80.3
P10809_1031
123.4
P10809_1050
97.0
P10809_1069
127.2
P10809_1087
126.4
P10809_1110
100.4
T-reg nTPM: 91.8
Samples: 6
Max nTPM: 103.5
Min nTPM: 74.6
P10809_1018
74.6
P10809_1037
94.5
P10809_1056
99.5
P10809_1075
87.5
P10809_1094
103.5
P10809_1106
91.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
298.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 193.1
Samples: 4
Max nTPM: 212.9
Min nTPM: 174.9
RHH5202_R3573
209.6
RHH5230_R3602
175.1
RHH5259_R3631
174.9
RHH5288_R3660
212.9
Effector memory CD8 T-cell nTPM: 203.3
Samples: 4
Max nTPM: 271.8
Min nTPM: 142.9
RHH5203_R3574
142.9
RHH5231_R3603
271.8
RHH5260_R3632
179.4
RHH5289_R3661
219.0
MAIT T-cell nTPM: 212.9
Samples: 4
Max nTPM: 233.7
Min nTPM: 164.6
RHH5233_R3605
221.9
RHH5205_R3576
164.6
RHH5262_R3634
231.3
RHH5297_R3663
233.7
Memory CD4 T-cell TFH nTPM: 176.9
Samples: 4
Max nTPM: 253.0
Min nTPM: 129.8
RHH5300_R3666
129.8
RHH5236_R3608
253.0
RHH5265_R3637
141.7
RHH5208_R3579
183.1
Memory CD4 T-cell Th1 nTPM: 165.7
Samples: 4
Max nTPM: 202.5
Min nTPM: 141.5
RHH5210_R3581
202.5
RHH5302_R3668
165.1
RHH5238_R3610
153.5
RHH5267_R3639
141.5
Memory CD4 T-cell Th1/Th17 nTPM: 153.9
Samples: 4
Max nTPM: 204.6
Min nTPM: 100.8
RHH5303_R3669
158.4
RHH5211_R3582
204.6
RHH5239_R3611
100.8
RHH5268_R3640
151.7
Memory CD4 T-cell Th17 nTPM: 144.5
Samples: 4
Max nTPM: 164.8
Min nTPM: 120.2
RHH5304_R3670
135.0
RHH5212_R3583
164.8
RHH5240_R3612
158.1
RHH5269_R3641
120.2
Memory CD4 T-cell Th2 nTPM: 174.4
Samples: 4
Max nTPM: 234.1
Min nTPM: 148.9
RHH5305_R3671
156.2
RHH5213_R3584
158.2
RHH5241_R3613
234.1
RHH5270_R3642
148.9
Naive CD4 T-cell nTPM: 240.8
Samples: 4
Max nTPM: 248.3
Min nTPM: 236.7
RHH5306_R3672
241.4
RHH5214_R3585
248.3
RHH5242_R3614
236.7
RHH5271_R3643
236.9
Naive CD8 T-cell nTPM: 295.6
Samples: 4
Max nTPM: 327.7
Min nTPM: 232.4
RHH5201_R3572
327.7
RHH5229_R3601
232.4
RHH5258_R3630
323.0
RHH5287_R3659
299.3
Non-Vd2 gdTCR nTPM: 298.0
Samples: 4
Max nTPM: 400.9
Min nTPM: 245.8
RHH5235_R3607
245.8
RHH5264_R3636
400.9
RHH5207_R3578
276.4
RHH5299_R3665
268.7
T-reg nTPM: 152.6
Samples: 4
Max nTPM: 178.1
Min nTPM: 128.3
RHH5301_R3667
158.4
RHH5237_R3609
178.1
RHH5266_R3638
128.3
RHH5209_R3580
145.7
Terminal effector memory CD4 T-cell nTPM: 164.0
Samples: 2
Max nTPM: 197.3
Min nTPM: 130.6
RHH5243_R3615
130.6
RHH5272_R3644
197.3
Terminal effector memory CD8 T-cell nTPM: 291.1
Samples: 4
Max nTPM: 355.5
Min nTPM: 246.9
RHH5232_R3604
303.8
RHH5204_R3575
355.5
RHH5261_R3633
258.0
RHH5296_R3662
246.9
Vd2 gdTCR nTPM: 269.1
Samples: 4
Max nTPM: 351.4
Min nTPM: 221.9
RHH5234_R3606
274.5
RHH5206_R3577
351.4
RHH5263_R3635
228.7
RHH5298_R3664
221.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
