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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
17.7
nTPM
HPA:
12.9
nTPM
GTEx:
17.7
nTPM
FANTOM5:
12.9
Scaled Tags Per Million
SMALL INTESTINE - Annotated protein expression
Pending normal tissue analysis
SMALL INTESTINE - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPM
12.9
Male, age 65
Small intestine sample 232 nTPM: 9.9
Cell types%
Glandular cells:
55
Smooth muscle cells:
5
Other cell types:
40
Male, age 39
Small intestine sample 233 nTPM: 12.7
Cell types%
Glandular cells:
40
Smooth muscle cells:
5
Other cell types:
55
Male, age 68
Small intestine sample 234 nTPM: 15.4
Cell types%
Glandular cells:
30
Smooth muscle cells:
15
Other cell types:
55
Male, age 85
Small intestine sample 235 nTPM: 13.5
SMALL INTESTINE - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
17.7
GTEx sample id
Sample description
nTPM
Small Intestine - Terminal Ileum Average nTPM: 17.7
Samples: 187
Max nTPM: 46.2
Min nTPM: 10.3
Std nTPM: 4.7
Median nTPM: 16.8
GTEX-1R9K4-2326-SM-E6CRB
60-69 years, male
46.2
GTEX-131XE-0926-SM-5HL7J
50-59 years, male
31.4
GTEX-1B8KZ-1126-SM-7IGLX
50-59 years, male
30.0
GTEX-1LH75-1926-SM-DIPGD
50-59 years, female
29.2
GTEX-13NYB-1826-SM-5J1N3
40-49 years, male
28.7
GTEX-Y111-2226-SM-4SOJB
50-59 years, male
28.6
GTEX-1S5ZA-1326-SM-EV7BB
20-29 years, male
28.3
GTEX-13OVI-1926-SM-5IJCG
60-69 years, female
27.2
GTEX-14C39-1826-SM-5ZZW4
40-49 years, male
27.2
GTEX-1JMQK-2426-SM-CXZJU
60-69 years, male
26.4
GTEX-1GMR3-2726-SM-7MKFB
40-49 years, male
25.4
GTEX-148VJ-2226-SM-5NQ9M
70-79 years, male
25.1
GTEX-ZC5H-2326-SM-4WAYT
40-49 years, female
25.1
GTEX-15DZA-0826-SM-6AJBF
30-39 years, female
24.1
GTEX-1JJE9-2226-SM-CXZJM
70-79 years, male
24.1
GTEX-WRHK-1026-SM-4MVOD
20-29 years, female
23.8
GTEX-13O21-1026-SM-5IJDU
50-59 years, male
23.6
GTEX-1192X-2526-SM-59868
50-59 years, male
23.5
GTEX-18A66-2526-SM-7KFTZ
60-69 years, male
23.5
GTEX-11DXZ-1326-SM-5H11X
50-59 years, male
23.4
GTEX-145ME-0926-SM-5O9AR
40-49 years, female
23.3
GTEX-XMK1-1826-SM-4B66F
40-49 years, male
23.3
GTEX-139T6-1026-SM-5IJGC
50-59 years, male
23.0
GTEX-13QBU-1926-SM-5IJEW
40-49 years, female
22.8
GTEX-YF7O-1826-SM-5IFIU
50-59 years, male
22.8
GTEX-Y3I4-1326-SM-4TT8Z
50-59 years, male
22.6
GTEX-13RTK-0826-SM-5Q5C6
20-29 years, male
22.5
GTEX-13111-1426-SM-5DUW3
50-59 years, male
22.0
GTEX-1R7EV-1226-SM-DTX82
40-49 years, male
22.0
GTEX-ZF2S-1726-SM-57WFT
50-59 years, female
21.9
GTEX-11TUW-1926-SM-5BC58
60-69 years, male
21.8
GTEX-Y5V5-1826-SM-4VDS5
60-69 years, female
21.7
GTEX-1K9T9-2726-SM-D4P3E
50-59 years, female
21.6
GTEX-12WSK-1526-SM-5CVNO
40-49 years, female
21.5
GTEX-139YR-2226-SM-5IFFW
50-59 years, male
21.4
GTEX-ZQG8-2526-SM-57WEQ
60-69 years, female
21.4
GTEX-15EU6-1826-SM-7PC1W
50-59 years, male
21.0
GTEX-1J8QM-1026-SM-C1YQA
60-69 years, female
21.0
GTEX-1L5NE-1826-SM-EV79T
50-59 years, male
20.8
GTEX-WFG8-1626-SM-4LVMB
20-29 years, male
20.7
GTEX-1LGOU-1426-SM-D3L8N
20-29 years, female
20.6
GTEX-WYJK-1526-SM-4ONCW
50-59 years, male
20.4
GTEX-17MFQ-1026-SM-7KFSZ
20-29 years, male
20.3
GTEX-18QFQ-1626-SM-72D7H
30-39 years, male
20.1
GTEX-1H1DE-1426-SM-9JGHV
20-29 years, male
20.0
GTEX-17KNJ-1626-SM-718AL
50-59 years, male
19.9
GTEX-1BAJH-2526-SM-7IGOT
70-79 years, male
19.9
GTEX-WQUQ-2426-SM-4MVNW
60-69 years, male
19.9
GTEX-VUSG-1726-SM-4KKZL
50-59 years, male
19.8
GTEX-XBED-1426-SM-4AT4G
60-69 years, male
19.8
GTEX-14PJ3-1326-SM-664O7
50-59 years, male
19.7
GTEX-16NGA-1126-SM-7KFSY
40-49 years, female
19.6
GTEX-Z9EW-0926-SM-5CVMM
40-49 years, male
19.4
GTEX-ZTPG-2626-SM-57WFX
20-29 years, female
19.4
GTEX-1QCLZ-2126-SM-EWRNC
60-69 years, female
19.2
GTEX-ZTX8-0526-SM-59HLD
20-29 years, male
18.9
GTEX-1F75I-2526-SM-9WPOZ
40-49 years, male
18.9
GTEX-117YX-0326-SM-5GICL
50-59 years, male
18.8
GTEX-11NSD-1726-SM-5N9C3
20-29 years, male
18.7
GTEX-133LE-1426-SM-5IFH1
20-29 years, female
18.7
GTEX-1PDJ9-1826-SM-E9U66
20-29 years, male
18.7
GTEX-Y3IK-1726-SM-4YCCR
50-59 years, female
18.6
GTEX-YEC4-1726-SM-4W21E
40-49 years, male
18.6
GTEX-1H11D-2526-SM-9JGGU
40-49 years, male
18.5
GTEX-WFON-1526-SM-4LVMP
40-49 years, male
18.4
GTEX-1QW4Y-1226-SM-EWRMY
30-39 years, male
18.4
GTEX-11P82-0826-SM-5P9GU
20-29 years, male
18.3
GTEX-17HHE-1726-SM-79OKT
50-59 years, male
18.3
GTEX-14PN3-2026-SM-68729
60-69 years, female
18.2
GTEX-ZA64-1226-SM-5HL7B
20-29 years, male
18.2
GTEX-WH7G-1626-SM-4LVMY
40-49 years, male
18.1
GTEX-ZP4G-1626-SM-57WGD
20-29 years, female
18.1
GTEX-1CB4F-1826-SM-7MGXI
60-69 years, male
18.1
GTEX-1RAZA-1826-SM-DTXA2
20-29 years, male
18.1
GTEX-13113-1226-SM-5EGHT
60-69 years, female
18.0
GTEX-14PKV-2026-SM-6AJ9A
20-29 years, female
18.0
GTEX-ZPIC-2326-SM-57WDW
40-49 years, female
18.0
GTEX-Y114-1426-SM-4TT6W
50-59 years, female
17.9
GTEX-1R9JW-1926-SM-EVR4J
30-39 years, female
17.9
GTEX-XXEK-1026-SM-4BRUW
50-59 years, male
17.8
GTEX-1I1GT-1826-SM-ARZLW
60-69 years, female
17.8
GTEX-1IKOE-1926-SM-ARU7V
30-39 years, female
17.8
GTEX-1HSMQ-2226-SM-C1YRD
50-59 years, male
17.5
GTEX-1LBAC-1526-SM-CXZKU
20-29 years, male
17.5
GTEX-1B8KE-1726-SM-7IGMN
50-59 years, male
17.4
GTEX-WHSB-1026-SM-4M1XN
50-59 years, male
17.4
GTEX-Y9LG-1626-SM-5IFHM
30-39 years, male
17.3
GTEX-1MGNQ-2326-SM-EV7BG
40-49 years, male
17.2
GTEX-1PIEJ-1526-SM-E6CP8
20-29 years, female
17.2
GTEX-1RAZR-1826-SM-E6CRE
40-49 years, male
17.2
GTEX-183FY-1626-SM-793D8
20-29 years, male
17.1
GTEX-1R9PM-1626-SM-DPRY9
20-29 years, male
17.0
GTEX-ZQUD-0926-SM-57WE3
30-39 years, male
16.9
GTEX-13CF3-1226-SM-5LZXN
60-69 years, female
16.8
GTEX-13W3W-2026-SM-5K7UL
60-69 years, female
16.8
GTEX-1R9K5-2026-SM-E6CPS
50-59 years, male
16.8
GTEX-1GL5R-2026-SM-7MKHP
50-59 years, male
16.7
GTEX-1OJC3-1626-SM-E9U65
20-29 years, male
16.7
GTEX-1399R-2026-SM-5K7WN
30-39 years, male
16.6
GTEX-13X6H-1826-SM-7EWCZ
50-59 years, female
16.6
GTEX-1497J-1926-SM-5TDCC
60-69 years, male
16.6
GTEX-16AAH-1426-SM-7KFTR
50-59 years, male
16.6
GTEX-WFG7-1726-SM-4LVME
20-29 years, male
16.6
GTEX-X5EB-1626-SM-4E3IV
40-49 years, male
16.6
GTEX-ZEX8-1826-SM-57WBH
50-59 years, male
16.6
GTEX-1QP28-1726-SM-E6CRK
50-59 years, female
16.6
GTEX-11LCK-1926-SM-5A5KE
30-39 years, male
16.3
GTEX-11XUK-1426-SM-5EQMG
40-49 years, female
16.3
GTEX-1C64O-2526-SM-79ONO
60-69 years, male
16.2
GTEX-XAJ8-0526-SM-47JYK
40-49 years, male
16.2
GTEX-1OKEX-1126-SM-DTXEB
60-69 years, male
16.2
GTEX-ZDTT-1726-SM-5HL69
60-69 years, male
16.2
GTEX-ZLV1-1126-SM-4WWBW
60-69 years, female
16.1
GTEX-ZG7Y-1926-SM-DNZZ5
50-59 years, male
15.9
GTEX-XGQ4-1326-SM-4GIDU
50-59 years, male
15.7
GTEX-1RAZQ-2226-SM-DPRZR
30-39 years, male
15.7
GTEX-1JK1U-1226-SM-CNNPN
60-69 years, male
15.6
GTEX-XPVG-1726-SM-4B65W
50-59 years, male
15.5
GTEX-11VI4-1626-SM-5EQKO
40-49 years, female
15.4
GTEX-14DAR-1426-SM-5RQIR
50-59 years, male
15.4
GTEX-1399U-2126-SM-5IFEZ
50-59 years, female
15.3
GTEX-16A39-1426-SM-6LLI6
30-39 years, female
15.3
GTEX-1EMGI-2826-SM-7IGMR
60-69 years, male
15.3
GTEX-1JN76-1126-SM-C1YRL
20-29 years, female
15.3
GTEX-13PL7-2626-SM-5IFH4
60-69 years, female
15.2
GTEX-144GM-1026-SM-79OKU
20-29 years, male
15.2
GTEX-145LT-1026-SM-5LU9O
40-49 years, male
15.2
GTEX-14PJN-0826-SM-686ZL
30-39 years, male
15.2
GTEX-1QPFJ-2626-SM-DPRZU
30-39 years, female
15.1
GTEX-131XF-1326-SM-5GCMQ
60-69 years, male
15.0
GTEX-131XG-1726-SM-5LZUR
50-59 years, female
15.0
GTEX-UPK5-2026-SM-4JBIM
40-49 years, male
15.0
GTEX-WEY5-1526-SM-4LMJF
40-49 years, female
15.0
GTEX-ZZ64-0526-SM-5GZXM
20-29 years, male
15.0
GTEX-1GMR2-1026-SM-7MKHJ
50-59 years, male
14.9
GTEX-Y5LM-1626-SM-4VDTB
40-49 years, female
14.9
GTEX-ZVZP-1826-SM-5GZXB
50-59 years, male
14.7
GTEX-111CU-1326-SM-5NQ8L
50-59 years, male
14.6
GTEX-WFJO-0926-SM-4LVM2
30-39 years, male
14.6
GTEX-XUZC-1426-SM-4BRV3
30-39 years, female
14.6
GTEX-VJYA-0926-SM-4KL1N
60-69 years, male
14.4
GTEX-X15G-1426-SM-4PQZK
50-59 years, female
14.4
GTEX-1MUQO-2426-SM-EAZ5A
60-69 years, male
14.3
GTEX-1QP2A-2426-SM-EXOJA
50-59 years, male
14.3
GTEX-1R7EU-1326-SM-E6CQ6
60-69 years, male
14.2
GTEX-1CAMR-0826-SM-7MKFK
20-29 years, male
14.1
GTEX-1CAMS-2426-SM-7DHMV
40-49 years, female
14.0
GTEX-11P7K-1626-SM-5GU63
30-39 years, male
13.9
GTEX-12BJ1-1926-SM-5HL9Z
60-69 years, male
13.9
GTEX-13FH7-1226-SM-5IJFK
50-59 years, female
13.7
GTEX-13FTW-2026-SM-5IJE2
40-49 years, male
13.7
GTEX-ZTSS-0926-SM-59865
40-49 years, male
13.7
GTEX-ZYFG-2026-SM-5E43Y
60-69 years, female
13.6
GTEX-WY7C-1826-SM-4ONCE
50-59 years, male
13.5
GTEX-ZVT2-2126-SM-5NQ93
50-59 years, female
13.5
GTEX-1S82Z-1826-SM-E9TIK
30-39 years, female
13.5
GTEX-14BMU-1426-SM-5TDE5
20-29 years, female
13.3
GTEX-14PJ6-1726-SM-6AJBN
60-69 years, female
13.3
GTEX-1AX8Z-2526-SM-731E3
60-69 years, male
13.3
GTEX-ZVP2-1726-SM-5GU5P
50-59 years, male
13.3
GTEX-13D11-0726-SM-5LZZB
50-59 years, female
13.2
GTEX-13O61-1326-SM-5KM31
60-69 years, male
13.2
GTEX-14PK6-1626-SM-6871I
70-79 years, female
13.1
GTEX-ZAB5-1526-SM-5HL9P
50-59 years, male
13.1
GTEX-ZLFU-1526-SM-4WWBT
40-49 years, male
13.1
GTEX-1KXAM-2026-SM-DHXKI
60-69 years, male
13.1
GTEX-1C475-1426-SM-793CH
40-49 years, female
13.0
GTEX-14E6E-1626-SM-5RQI7
30-39 years, male
12.9
GTEX-14PKU-1626-SM-6871C
40-49 years, female
12.8
GTEX-11I78-1126-SM-5A5K5
50-59 years, female
12.6
GTEX-ZF29-1626-SM-4WKFJ
60-69 years, female
12.5
GTEX-1J8Q3-2526-SM-CNNQ4
60-69 years, male
12.5
GTEX-ZLWG-1626-SM-DNZZ1
50-59 years, female
12.5
GTEX-ZXES-1526-SM-5NQ95
30-39 years, female
12.4
GTEX-YB5E-1526-SM-5IFIE
40-49 years, male
12.2
GTEX-1122O-1326-SM-5H11F
60-69 years, female
11.9
GTEX-1NSGN-2126-SM-DPRYN
50-59 years, male
11.8
GTEX-11EQ9-1326-SM-5985X
30-39 years, male
11.6
GTEX-15G1A-1726-SM-6LPI4
30-39 years, male
11.6
GTEX-111YS-1426-SM-5GID8
60-69 years, male
11.5
GTEX-16MTA-1526-SM-6LPJB
50-59 years, male
11.2
GTEX-14XAO-1926-SM-6ETZO
60-69 years, female
10.6
GTEX-YFCO-1326-SM-664NV
40-49 years, male
10.6
GTEX-ZPCL-1726-SM-57WEO
60-69 years, female
10.5
GTEX-1399S-2026-SM-5KM4B
30-39 years, female
10.4
GTEX-1AMFI-1926-SM-731F2
50-59 years, female
10.4
GTEX-11DXX-1626-SM-5H11H
60-69 years, female
10.3
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SMALL INTESTINE - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
The Human Protein Atlas project is funded
