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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
15.2
nTPM
Monaco:
2036.3
nTPM
Schmiedel:
4758.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
15.2
HPA sample
nTPM
gdT-cell nTPM: 11.5
Samples: 6
Max nTPM: 28.1
Min nTPM: 4.0
P10809_1007
9.0
P10809_1022
14.4
P10809_1041
6.2
P10809_1060
28.1
P10809_1077
7.3
P10809_1098
4.0
MAIT T-cell nTPM: 15.2
Samples: 6
Max nTPM: 26.5
Min nTPM: 5.2
P10809_1006
26.5
P10809_1024
14.4
P10809_1043
14.0
P10809_1062
15.6
P10809_1083
15.3
P10809_1097
5.2
Memory CD4 T-cell nTPM: 11.1
Samples: 6
Max nTPM: 16.9
Min nTPM: 4.6
P10809_1014
16.9
P10809_1026
4.6
P10809_1045
8.2
P10809_1064
16.2
P10809_1086
8.4
P10809_1113
12.1
Memory CD8 T-cell nTPM: 10.9
Samples: 5
Max nTPM: 15.9
Min nTPM: 5.7
P10809_1012
14.9
P10809_1027
8.0
P10809_1046
10.0
P10809_1065
15.9
P10809_1111
5.7
Naive CD4 T-cell nTPM: 7.8
Samples: 6
Max nTPM: 11.0
Min nTPM: 4.7
P10809_1015
11.0
P10809_1030
7.4
P10809_1049
4.7
P10809_1068
9.7
P10809_1085
6.4
P10809_1112
7.3
Naive CD8 T-cell nTPM: 6.1
Samples: 6
Max nTPM: 8.5
Min nTPM: 2.8
P10809_1016
8.5
P10809_1031
2.8
P10809_1050
5.5
P10809_1069
8.2
P10809_1087
7.0
P10809_1110
4.6
T-reg nTPM: 12.3
Samples: 6
Max nTPM: 25.3
Min nTPM: 3.5
P10809_1018
25.3
P10809_1037
8.9
P10809_1056
3.5
P10809_1075
7.8
P10809_1094
18.3
P10809_1106
9.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
2036.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 1346.2
Samples: 4
Max nTPM: 2241.7
Min nTPM: 673.2
RHH5202_R3573
2241.7
RHH5230_R3602
1500.7
RHH5259_R3631
969.2
RHH5288_R3660
673.2
Effector memory CD8 T-cell nTPM: 1030.9
Samples: 4
Max nTPM: 1871.5
Min nTPM: 595.8
RHH5203_R3574
1871.5
RHH5231_R3603
938.7
RHH5260_R3632
717.4
RHH5289_R3661
595.8
MAIT T-cell nTPM: 1817.4
Samples: 4
Max nTPM: 4081.6
Min nTPM: 739.8
RHH5233_R3605
1675.1
RHH5205_R3576
4081.6
RHH5262_R3634
772.9
RHH5297_R3663
739.8
Memory CD4 T-cell TFH nTPM: 634.3
Samples: 4
Max nTPM: 1143.1
Min nTPM: 361.5
RHH5300_R3666
438.8
RHH5236_R3608
593.8
RHH5265_R3637
361.5
RHH5208_R3579
1143.1
Memory CD4 T-cell Th1 nTPM: 1123.4
Samples: 4
Max nTPM: 1817.4
Min nTPM: 533.0
RHH5210_R3581
1545.6
RHH5302_R3668
597.4
RHH5238_R3610
1817.4
RHH5267_R3639
533.0
Memory CD4 T-cell Th1/Th17 nTPM: 2036.3
Samples: 4
Max nTPM: 3555.5
Min nTPM: 861.4
RHH5303_R3669
1235.8
RHH5211_R3582
3555.5
RHH5239_R3611
2492.3
RHH5268_R3640
861.4
Memory CD4 T-cell Th17 nTPM: 1453.7
Samples: 4
Max nTPM: 2293.7
Min nTPM: 775.3
RHH5304_R3670
1118.7
RHH5212_R3583
2293.7
RHH5240_R3612
1626.9
RHH5269_R3641
775.3
Memory CD4 T-cell Th2 nTPM: 1052.6
Samples: 4
Max nTPM: 1731.1
Min nTPM: 596.3
RHH5305_R3671
672.6
RHH5213_R3584
1731.1
RHH5241_R3613
1210.2
RHH5270_R3642
596.3
Naive CD4 T-cell nTPM: 433.9
Samples: 4
Max nTPM: 716.6
Min nTPM: 240.8
RHH5306_R3672
277.7
RHH5214_R3585
716.6
RHH5242_R3614
500.4
RHH5271_R3643
240.8
Naive CD8 T-cell nTPM: 480.8
Samples: 4
Max nTPM: 833.6
Min nTPM: 289.5
RHH5201_R3572
471.1
RHH5229_R3601
833.6
RHH5258_R3630
328.8
RHH5287_R3659
289.5
Non-Vd2 gdTCR nTPM: 697.3
Samples: 4
Max nTPM: 1046.1
Min nTPM: 325.4
RHH5235_R3607
1022.0
RHH5264_R3636
395.7
RHH5207_R3578
1046.1
RHH5299_R3665
325.4
T-reg nTPM: 572.8
Samples: 4
Max nTPM: 876.2
Min nTPM: 315.2
RHH5301_R3667
388.8
RHH5237_R3609
711.1
RHH5266_R3638
315.2
RHH5209_R3580
876.2
Terminal effector memory CD4 T-cell nTPM: 586.0
Samples: 2
Max nTPM: 707.7
Min nTPM: 464.2
RHH5243_R3615
707.7
RHH5272_R3644
464.2
Terminal effector memory CD8 T-cell nTPM: 644.0
Samples: 4
Max nTPM: 811.9
Min nTPM: 435.2
RHH5232_R3604
811.9
RHH5204_R3575
802.1
RHH5261_R3633
526.6
RHH5296_R3662
435.2
Vd2 gdTCR nTPM: 1321.8
Samples: 4
Max nTPM: 1947.5
Min nTPM: 585.5
RHH5234_R3606
1788.3
RHH5206_R3577
1947.5
RHH5263_R3635
966.0
RHH5298_R3664
585.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
