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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
46.3
nTPM
Monaco:
159.2
nTPM
Schmiedel:
134.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
46.3
HPA sample
nTPM
gdT-cell nTPM: 46.3
Samples: 6
Max nTPM: 53.6
Min nTPM: 32.1
P10809_1007
32.1
P10809_1022
53.5
P10809_1041
52.0
P10809_1060
38.1
P10809_1077
48.6
P10809_1098
53.6
MAIT T-cell nTPM: 45.0
Samples: 6
Max nTPM: 54.0
Min nTPM: 35.6
P10809_1006
36.7
P10809_1024
50.2
P10809_1043
35.6
P10809_1062
49.4
P10809_1083
43.9
P10809_1097
54.0
Memory CD4 T-cell nTPM: 42.6
Samples: 6
Max nTPM: 53.8
Min nTPM: 33.8
P10809_1014
36.4
P10809_1026
33.8
P10809_1045
41.3
P10809_1064
49.4
P10809_1086
53.8
P10809_1113
40.9
Memory CD8 T-cell nTPM: 44.6
Samples: 5
Max nTPM: 53.1
Min nTPM: 38.7
P10809_1012
38.9
P10809_1027
48.6
P10809_1046
38.7
P10809_1065
53.1
P10809_1111
43.8
Naive CD4 T-cell nTPM: 44.1
Samples: 6
Max nTPM: 48.8
Min nTPM: 35.8
P10809_1015
44.8
P10809_1030
35.8
P10809_1049
44.0
P10809_1068
44.3
P10809_1085
46.8
P10809_1112
48.8
Naive CD8 T-cell nTPM: 44.9
Samples: 6
Max nTPM: 61.6
Min nTPM: 32.6
P10809_1016
32.6
P10809_1031
40.8
P10809_1050
33.4
P10809_1069
49.2
P10809_1087
61.6
P10809_1110
51.9
T-reg nTPM: 40.7
Samples: 6
Max nTPM: 50.4
Min nTPM: 34.3
P10809_1018
36.4
P10809_1037
42.2
P10809_1056
38.7
P10809_1075
34.3
P10809_1094
42.3
P10809_1106
50.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
159.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 135.3
Samples: 4
Max nTPM: 154.3
Min nTPM: 106.0
RHH5202_R3573
143.2
RHH5230_R3602
137.5
RHH5259_R3631
154.3
RHH5288_R3660
106.0
Effector memory CD8 T-cell nTPM: 147.1
Samples: 4
Max nTPM: 164.7
Min nTPM: 132.3
RHH5203_R3574
146.8
RHH5231_R3603
132.3
RHH5260_R3632
144.5
RHH5289_R3661
164.7
MAIT T-cell nTPM: 139.0
Samples: 4
Max nTPM: 183.2
Min nTPM: 118.2
RHH5233_R3605
118.2
RHH5205_R3576
183.2
RHH5262_R3634
128.9
RHH5297_R3663
125.6
Memory CD4 T-cell TFH nTPM: 103.3
Samples: 4
Max nTPM: 122.9
Min nTPM: 76.5
RHH5300_R3666
76.5
RHH5236_R3608
116.8
RHH5265_R3637
97.0
RHH5208_R3579
122.9
Memory CD4 T-cell Th1 nTPM: 116.8
Samples: 4
Max nTPM: 133.5
Min nTPM: 97.7
RHH5210_R3581
133.5
RHH5302_R3668
97.7
RHH5238_R3610
107.8
RHH5267_R3639
128.1
Memory CD4 T-cell Th1/Th17 nTPM: 137.9
Samples: 4
Max nTPM: 159.2
Min nTPM: 112.6
RHH5303_R3669
128.8
RHH5211_R3582
151.1
RHH5239_R3611
159.2
RHH5268_R3640
112.6
Memory CD4 T-cell Th17 nTPM: 117.4
Samples: 4
Max nTPM: 126.8
Min nTPM: 109.2
RHH5304_R3670
109.2
RHH5212_R3583
118.5
RHH5240_R3612
126.8
RHH5269_R3641
115.2
Memory CD4 T-cell Th2 nTPM: 136.7
Samples: 4
Max nTPM: 166.9
Min nTPM: 95.4
RHH5305_R3671
95.4
RHH5213_R3584
166.9
RHH5241_R3613
135.1
RHH5270_R3642
149.2
Naive CD4 T-cell nTPM: 101.2
Samples: 4
Max nTPM: 130.8
Min nTPM: 87.2
RHH5306_R3672
87.2
RHH5214_R3585
130.8
RHH5242_R3614
96.4
RHH5271_R3643
90.5
Naive CD8 T-cell nTPM: 125.3
Samples: 4
Max nTPM: 151.8
Min nTPM: 99.3
RHH5201_R3572
137.7
RHH5229_R3601
151.8
RHH5258_R3630
99.3
RHH5287_R3659
112.4
Non-Vd2 gdTCR nTPM: 149.9
Samples: 4
Max nTPM: 178.5
Min nTPM: 114.8
RHH5235_R3607
149.0
RHH5264_R3636
157.3
RHH5207_R3578
178.5
RHH5299_R3665
114.8
T-reg nTPM: 129.0
Samples: 4
Max nTPM: 167.9
Min nTPM: 80.7
RHH5301_R3667
80.7
RHH5237_R3609
167.9
RHH5266_R3638
113.8
RHH5209_R3580
153.5
Terminal effector memory CD4 T-cell nTPM: 137.7
Samples: 2
Max nTPM: 162.6
Min nTPM: 112.8
RHH5243_R3615
162.6
RHH5272_R3644
112.8
Terminal effector memory CD8 T-cell nTPM: 159.2
Samples: 4
Max nTPM: 181.0
Min nTPM: 147.4
RHH5232_R3604
159.2
RHH5204_R3575
147.4
RHH5261_R3633
181.0
RHH5296_R3662
149.2
Vd2 gdTCR nTPM: 138.9
Samples: 4
Max nTPM: 168.9
Min nTPM: 87.0
RHH5234_R3606
136.9
RHH5206_R3577
168.9
RHH5263_R3635
162.6
RHH5298_R3664
87.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
