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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
667.4
nTPM
Monaco:
150.2
nTPM
Schmiedel:
358.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
667.4
HPA sample
nTPM
gdT-cell nTPM: 470.6
Samples: 6
Max nTPM: 594.8
Min nTPM: 358.8
P10809_1007
358.8
P10809_1022
460.2
P10809_1041
539.4
P10809_1060
408.0
P10809_1077
594.8
P10809_1098
462.6
MAIT T-cell nTPM: 456.6
Samples: 6
Max nTPM: 575.5
Min nTPM: 287.2
P10809_1006
287.2
P10809_1024
575.5
P10809_1043
473.3
P10809_1062
427.2
P10809_1083
450.4
P10809_1097
526.2
Memory CD4 T-cell nTPM: 538.8
Samples: 6
Max nTPM: 632.1
Min nTPM: 345.9
P10809_1014
345.9
P10809_1026
632.1
P10809_1045
562.1
P10809_1064
541.6
P10809_1086
596.4
P10809_1113
554.7
Memory CD8 T-cell nTPM: 463.5
Samples: 5
Max nTPM: 542.3
Min nTPM: 298.8
P10809_1012
298.8
P10809_1027
513.8
P10809_1046
506.2
P10809_1065
542.3
P10809_1111
456.3
Naive CD4 T-cell nTPM: 424.7
Samples: 6
Max nTPM: 553.5
Min nTPM: 256.0
P10809_1015
256.0
P10809_1030
530.9
P10809_1049
553.5
P10809_1068
393.1
P10809_1085
421.5
P10809_1112
393.2
Naive CD8 T-cell nTPM: 443.5
Samples: 6
Max nTPM: 549.9
Min nTPM: 295.1
P10809_1016
295.1
P10809_1031
515.0
P10809_1050
436.8
P10809_1069
462.5
P10809_1087
549.9
P10809_1110
401.6
T-reg nTPM: 667.4
Samples: 6
Max nTPM: 885.3
Min nTPM: 377.6
P10809_1018
377.6
P10809_1037
653.1
P10809_1056
885.3
P10809_1075
695.3
P10809_1094
704.5
P10809_1106
688.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
150.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 85.9
Samples: 4
Max nTPM: 106.7
Min nTPM: 65.5
RHH5202_R3573
69.5
RHH5230_R3602
65.5
RHH5259_R3631
106.7
RHH5288_R3660
102.0
Effector memory CD8 T-cell nTPM: 70.0
Samples: 4
Max nTPM: 83.8
Min nTPM: 57.7
RHH5203_R3574
73.6
RHH5231_R3603
64.7
RHH5260_R3632
83.8
RHH5289_R3661
57.7
MAIT T-cell nTPM: 89.1
Samples: 4
Max nTPM: 104.7
Min nTPM: 78.6
RHH5233_R3605
80.9
RHH5205_R3576
104.7
RHH5262_R3634
78.6
RHH5297_R3663
92.2
Memory CD4 T-cell TFH nTPM: 121.7
Samples: 4
Max nTPM: 225.5
Min nTPM: 74.8
RHH5300_R3666
90.2
RHH5236_R3608
225.5
RHH5265_R3637
74.8
RHH5208_R3579
96.3
Memory CD4 T-cell Th1 nTPM: 123.2
Samples: 4
Max nTPM: 152.1
Min nTPM: 85.9
RHH5210_R3581
85.9
RHH5302_R3668
152.1
RHH5238_R3610
147.0
RHH5267_R3639
107.7
Memory CD4 T-cell Th1/Th17 nTPM: 109.3
Samples: 4
Max nTPM: 116.9
Min nTPM: 100.8
RHH5303_R3669
116.9
RHH5211_R3582
106.7
RHH5239_R3611
100.8
RHH5268_R3640
112.7
Memory CD4 T-cell Th17 nTPM: 99.8
Samples: 4
Max nTPM: 117.0
Min nTPM: 72.4
RHH5304_R3670
117.0
RHH5212_R3583
98.8
RHH5240_R3612
111.1
RHH5269_R3641
72.4
Memory CD4 T-cell Th2 nTPM: 115.5
Samples: 4
Max nTPM: 140.0
Min nTPM: 89.2
RHH5305_R3671
140.0
RHH5213_R3584
111.3
RHH5241_R3613
121.4
RHH5270_R3642
89.2
Naive CD4 T-cell nTPM: 95.0
Samples: 4
Max nTPM: 150.7
Min nTPM: 64.3
RHH5306_R3672
93.0
RHH5214_R3585
150.7
RHH5242_R3614
64.3
RHH5271_R3643
71.8
Naive CD8 T-cell nTPM: 71.2
Samples: 4
Max nTPM: 81.3
Min nTPM: 65.2
RHH5201_R3572
65.2
RHH5229_R3601
71.0
RHH5258_R3630
67.1
RHH5287_R3659
81.3
Non-Vd2 gdTCR nTPM: 123.7
Samples: 4
Max nTPM: 167.8
Min nTPM: 88.8
RHH5235_R3607
88.8
RHH5264_R3636
108.9
RHH5207_R3578
129.4
RHH5299_R3665
167.8
T-reg nTPM: 117.3
Samples: 4
Max nTPM: 131.9
Min nTPM: 90.5
RHH5301_R3667
131.9
RHH5237_R3609
119.9
RHH5266_R3638
90.5
RHH5209_R3580
126.9
Terminal effector memory CD4 T-cell nTPM: 92.7
Samples: 2
Max nTPM: 111.2
Min nTPM: 74.1
RHH5243_R3615
111.2
RHH5272_R3644
74.1
Terminal effector memory CD8 T-cell nTPM: 150.2
Samples: 4
Max nTPM: 323.8
Min nTPM: 63.4
RHH5232_R3604
63.4
RHH5204_R3575
323.8
RHH5261_R3633
119.3
RHH5296_R3662
94.1
Vd2 gdTCR nTPM: 134.7
Samples: 4
Max nTPM: 226.8
Min nTPM: 59.7
RHH5234_R3606
59.7
RHH5206_R3577
226.8
RHH5263_R3635
109.4
RHH5298_R3664
143.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
