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IMMUNE CELL B-CELLS Show tissue menu
B-CELLS DENDRITIC CELLS GRANULOCYTES MONOCYTES NK-CELLS PROGENITORS T-CELLS TOTAL PBMC
Immune cell proteome
B-cells
B-CELLS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
HPA:438.4 nTPM
Monaco:336.8 nTPM
Schmiedel:136.9 TPM

B-CELLS - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM 438.4
HPA sample nTPM
Memory B-cell
nTPM: 438.4
Samples: 6

Max nTPM: 537.6
Min nTPM: 333.9
P10809_1017 333.9
P10809_1025 537.6
P10809_1044 444.5
P10809_1063 436.6
P10809_1092 476.9
P10809_1105 400.8
Naive B-cell
nTPM: 361.6
Samples: 6

Max nTPM: 545.0
Min nTPM: 237.4
P10809_1011 237.4
P10809_1029 379.8
P10809_1048 545.0
P10809_1067 319.4
P10809_1091 345.4
P10809_1104 342.5

B-CELLS - Monaco RNA-seqi

RNA-Seq data generated by Monaco et al is reported as average nTPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max nTPM 336.8
Monaco sample nTPM
Exhausted memory B-cell
nTPM: 319.2
Samples: 4

Max nTPM: 439.2
Min nTPM: 202.6
RHH5310_R3677 403.5
RHH5218_R3590 231.6
RHH5247_R3619 439.2
RHH5276_R3648 202.6
Naive B-cell
nTPM: 246.0
Samples: 4

Max nTPM: 325.2
Min nTPM: 147.9
RHH5308_R3675 325.2
RHH5216_R3588 303.9
RHH5245_R3617 147.9
RHH5274_R3646 206.9
Non-switched memory B-cell
nTPM: 304.2
Samples: 4

Max nTPM: 346.0
Min nTPM: 216.6
RHH5309_R3676 339.3
RHH5217_R3589 315.0
RHH5246_R3618 346.0
RHH5275_R3647 216.6
Plasmablast
nTPM: 168.7
Samples: 4

Max nTPM: 210.4
Min nTPM: 130.8
RHH5312_R3679 177.7
RHH5220_R3592 155.7
RHH5249_R3621 210.4
RHH5278_R3650 130.8
Switched memory B-cell
nTPM: 336.8
Samples: 4

Max nTPM: 523.8
Min nTPM: 207.4
RHH5311_R3678 523.8
RHH5219_R3591 362.7
RHH5248_R3620 253.3
RHH5277_R3649 207.4

B-CELLS - Schmiedel RNA-seqi

RNA-Seq data generated by Schmiedel et al is reported as average TPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.

Max TPM 136.9
Schmiedel sample id TPM
Naive B-cell
TPM: 136.9
Samples: 91

Max TPM: 221.3
Min TPM: 94.7
B_CELL_NAIVE_1 221.3
B_CELL_NAIVE_2 208.9
B_CELL_NAIVE_3 190.6
B_CELL_NAIVE_4 184.9
B_CELL_NAIVE_5 183.5
B_CELL_NAIVE_6 182.6
B_CELL_NAIVE_7 181.8
B_CELL_NAIVE_8 168.9
B_CELL_NAIVE_9 166.8
B_CELL_NAIVE_10 165.9
B_CELL_NAIVE_11 163.4
B_CELL_NAIVE_12 158.6
B_CELL_NAIVE_13 157.0
B_CELL_NAIVE_14 156.3
B_CELL_NAIVE_15 155.3
B_CELL_NAIVE_16 153.9
B_CELL_NAIVE_17 151.6
B_CELL_NAIVE_18 151.0
B_CELL_NAIVE_19 149.5
B_CELL_NAIVE_20 148.5
B_CELL_NAIVE_21 147.5
B_CELL_NAIVE_22 146.9
B_CELL_NAIVE_23 146.8
B_CELL_NAIVE_24 145.7
B_CELL_NAIVE_25 145.7
B_CELL_NAIVE_26 145.4
B_CELL_NAIVE_27 143.5
B_CELL_NAIVE_28 142.7
B_CELL_NAIVE_29 142.2
B_CELL_NAIVE_30 141.9
B_CELL_NAIVE_31 141.4
B_CELL_NAIVE_32 141.2
B_CELL_NAIVE_33 140.9
B_CELL_NAIVE_34 140.7
B_CELL_NAIVE_35 140.4
B_CELL_NAIVE_36 139.6
B_CELL_NAIVE_37 138.9
B_CELL_NAIVE_38 138.7
B_CELL_NAIVE_39 138.1
B_CELL_NAIVE_40 137.9
B_CELL_NAIVE_41 137.2
B_CELL_NAIVE_42 136.6
B_CELL_NAIVE_43 135.9
B_CELL_NAIVE_44 135.7
B_CELL_NAIVE_45 134.9
B_CELL_NAIVE_46 134.3
B_CELL_NAIVE_47 134.2
B_CELL_NAIVE_48 133.9
B_CELL_NAIVE_49 133.8
B_CELL_NAIVE_50 133.4
B_CELL_NAIVE_51 133.0
B_CELL_NAIVE_52 132.0
B_CELL_NAIVE_53 131.3
B_CELL_NAIVE_54 130.3
B_CELL_NAIVE_55 129.9
B_CELL_NAIVE_56 128.4
B_CELL_NAIVE_57 128.1
B_CELL_NAIVE_58 127.7
B_CELL_NAIVE_59 127.0
B_CELL_NAIVE_60 126.8
B_CELL_NAIVE_61 125.3
B_CELL_NAIVE_62 124.9
B_CELL_NAIVE_63 122.7
B_CELL_NAIVE_64 122.3
B_CELL_NAIVE_65 122.0
B_CELL_NAIVE_66 121.8
B_CELL_NAIVE_67 121.8
B_CELL_NAIVE_68 121.6
B_CELL_NAIVE_69 120.6
B_CELL_NAIVE_70 119.4
B_CELL_NAIVE_71 119.1
B_CELL_NAIVE_72 118.7
B_CELL_NAIVE_73 117.8
B_CELL_NAIVE_74 117.2
B_CELL_NAIVE_75 116.1
B_CELL_NAIVE_76 115.9
B_CELL_NAIVE_77 115.3
B_CELL_NAIVE_78 114.8
B_CELL_NAIVE_79 114.7
B_CELL_NAIVE_80 114.5
B_CELL_NAIVE_81 113.2
B_CELL_NAIVE_82 113.1
B_CELL_NAIVE_83 112.0
B_CELL_NAIVE_84 111.5
B_CELL_NAIVE_85 110.0
B_CELL_NAIVE_86 109.3
B_CELL_NAIVE_87 105.6
B_CELL_NAIVE_88 105.5
B_CELL_NAIVE_89 104.6
B_CELL_NAIVE_90 101.2
B_CELL_NAIVE_91 94.7
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