HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:456.4 nTPM
HPA Brain:307.0 nTPM
GTEx:456.4 nTPM
FANTOM5:901.8 Scaled Tags Per Million
Pig:138.9 nTPM
Mouse:35.7 nTPM
Allen mouse:1.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA027541
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 307.0
Sample id Sample description nTPM
Hippocampus
nTPM: 219.6
1898 Male, age 80, left hemisphere 303.1
2621 Female, age 67, right hemisphere 248.9
1855 Male, age 76, left hemisphere 225.8
2529 Female, age 94, left hemisphere 213.5
1911 Female, age 85, right hemisphere 184.5
2148 Female, age 91, left hemisphere 141.7
Dentate gyrus
nTPM: 227.6
2010 Male, age 76, both hemispheres 436.3
2530 Female, age 94, left hemisphere 328.2
2528 Male, age 74, both hemispheres 194.4
2531 Female, age 67, both hemispheres 152.6
2246 Female, age 85, both hemispheres 142.9
1927 Female, age 91, both hemispheres 111.0
Entorhinal gyrus
nTPM: 195.4
2117 Female, age 91, right hemisphere 352.4
1787 Male, age 76, left hemisphere 277.9
2764 Male, age 80, right hemisphere 193.5
1938 Female, age 85, left hemisphere 150.9
2686 Male, age 75, right hemisphere 102.3
2613 Female, age 94, left hemisphere 95.4
Hippocampus, CA1
nTPM: 184.2
2045 Male, age 76, both hemispheres 298.5
2749 Male, age 80, left hemisphere 178.0
2527 Male, age 74, both hemispheres 164.6
1873 Female, age 85, both hemispheres 140.3
2082 Female, age 91, right hemisphere 139.4
Hippocampus, CA2
nTPM: 265.6
1940 Female, age 85, left hemisphere 403.2
1892 Male, age 76, both hemispheres 343.1
2249 Male, age 74, both hemispheres 246.2
1963 Male, age 80, left hemisphere 227.3
2437 Female, age 94, left hemisphere 220.1
2113 Female, age 91, right hemisphere 153.6
Hippocampus, CA3
nTPM: 182.4
1867 Male, age 76, both hemispheres 437.1
1891 Female, age 85, both hemispheres 226.8
2436 Male, age 74, both hemispheres 182.8
2137 Male, age 80, left hemisphere 135.1
2861 Female, age 67, both hemispheres 59.6
2620 Female, age 94, left hemisphere 52.7
Parahippocampal cortex
nTPM: 183.6
2018 Male, age 76, both hemispheres 551.1
2532 Female, age 72, left hemisphere 247.7
2250 Female, age 67, right hemisphere 176.9
1850 Male, age 80, both hemispheres 157.1
2692 Male, age 74, both hemispheres 156.2
2245 Female, age 91, both hemispheres 150.0
1990 Female, age 91, right hemisphere 149.2
1933 Female, age 85, both hemispheres 117.3
2693 Female, age 94, both hemispheres 85.9
2622 Female, age 67, right hemisphere 44.5
Perirhinal gyrus
nTPM: 119.7
2848 Male, age 76, right hemisphere 182.2
2521 Female, age 94, right hemisphere 130.8
1794 Male, age 80, right hemisphere 125.8
1847 Female, age 91, left hemisphere 79.9
1841 Female, age 85, right hemisphere 79.6
Subiculum
nTPM: 307.0
2042 Male, age 76, both hemispheres 575.3
1901 Male, age 80, both hemispheres 352.2
2438 Female, age 94, left hemisphere 306.2
2619 Male, age 74, both hemispheres 227.7
1977 Female, age 85, both hemispheres 196.3
2729 Female, age 91, right hemisphere 184.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 456.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 456.4
Samples: 197

Max nTPM: 3476.2
Min nTPM: 12.9
Std nTPM: 439.1
Median nTPM: 342.6
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 3476.2
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 2674.0
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 2353.3
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 1942.4
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 1617.1
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 1481.6
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 1343.7
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 1265.2
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 1233.3
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 1229.5
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 1046.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 901.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 901.8
FF:10169-103B7 60 years, female 1118.5
FF:10153-102I9 76 years, female 685.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 138.9
Pig sample Sample description nTPM
Subiculum
nTPM: 58.5
Samples: 4

Max nTPM: 79.7
Min nTPM: 37.7
Sample A Female 79.7
Sample B Female 70.7
Sample C Male 37.7
Sample D Male 45.7
Dorsal hippocampus
nTPM: 138.8
Samples: 4

Max nTPM: 242.3
Min nTPM: 47.8
Sample A Female 242.3
Sample B Female 101.1
Sample C Male 164.1
Sample D Male 47.8
Entorhinal cortex
nTPM: 54.2
Samples: 4

Max nTPM: 97.8
Min nTPM: 30.9
Sample A Female 52.0
Sample B Female 97.8
Sample C Male 30.9
Sample D Male 36.1
Ventral hippocampus
nTPM: 83.6
Samples: 4

Max nTPM: 114.5
Min nTPM: 45.0
Sample A Female 108.8
Sample B Female 45.0
Sample C Male 66.0
Sample D Male 114.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 35.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 35.7
Samples: 4

Max nTPM: 45.1
Min nTPM: 27.5
Sample A Male 27.5
Sample B Male 33.8
Sample C Female 36.3
Sample D Female 45.1
Hippocampal formation
nTPM: 10.1
Samples: 4

Max nTPM: 15.8
Min nTPM: 5.0
Sample A Male 14.2
Sample B Male 5.0
Sample C Female 5.2
Sample D Female 15.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.4
513488 Antisense, RP_040810_01_H07, Mouse strain C57BL/6J (56 days, male) 1.7
69015350 Antisense, RP_050310_02_G08, Mouse strain C57BL/6J (56 days, male) 1.3
75651180 Antisense, RP_060518_01_C06, Mouse strain C57BL/6J (56 days, male) 1.1
70436740 Antisense, RP_050310_02_G08, Mouse strain C57BL/6J (56 days, male) 0.7

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