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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
182.6
nTPM
Monaco:
57.1
nTPM
Schmiedel:
75.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
182.6
HPA sample
nTPM
gdT-cell nTPM: 115.5
Samples: 6
Max nTPM: 136.8
Min nTPM: 99.2
P10809_1007
101.2
P10809_1022
99.2
P10809_1041
106.8
P10809_1060
121.0
P10809_1077
136.8
P10809_1098
127.8
MAIT T-cell nTPM: 128.7
Samples: 6
Max nTPM: 149.7
Min nTPM: 86.3
P10809_1006
86.3
P10809_1024
145.1
P10809_1043
112.7
P10809_1062
149.7
P10809_1083
135.4
P10809_1097
142.7
Memory CD4 T-cell nTPM: 132.5
Samples: 6
Max nTPM: 168.1
Min nTPM: 91.6
P10809_1014
109.2
P10809_1026
136.2
P10809_1045
91.6
P10809_1064
138.2
P10809_1086
151.9
P10809_1113
168.1
Memory CD8 T-cell nTPM: 134.9
Samples: 5
Max nTPM: 186.8
Min nTPM: 94.5
P10809_1012
94.5
P10809_1027
186.8
P10809_1046
99.9
P10809_1065
156.0
P10809_1111
137.4
Naive CD4 T-cell nTPM: 115.0
Samples: 6
Max nTPM: 141.8
Min nTPM: 80.5
P10809_1015
114.5
P10809_1030
128.2
P10809_1049
80.5
P10809_1068
141.8
P10809_1085
90.2
P10809_1112
134.8
Naive CD8 T-cell nTPM: 140.5
Samples: 6
Max nTPM: 167.6
Min nTPM: 117.1
P10809_1016
126.0
P10809_1031
159.2
P10809_1050
117.1
P10809_1069
149.7
P10809_1087
167.6
P10809_1110
123.4
T-reg nTPM: 182.6
Samples: 6
Max nTPM: 256.8
Min nTPM: 118.1
P10809_1018
156.7
P10809_1037
256.8
P10809_1056
118.1
P10809_1075
220.5
P10809_1094
183.7
P10809_1106
159.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
57.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 38.3
Samples: 4
Max nTPM: 56.5
Min nTPM: 24.1
RHH5202_R3573
24.1
RHH5230_R3602
44.8
RHH5259_R3631
56.5
RHH5288_R3660
27.8
Effector memory CD8 T-cell nTPM: 35.4
Samples: 4
Max nTPM: 55.8
Min nTPM: 22.7
RHH5203_R3574
36.5
RHH5231_R3603
22.7
RHH5260_R3632
55.8
RHH5289_R3661
26.7
MAIT T-cell nTPM: 35.1
Samples: 4
Max nTPM: 42.7
Min nTPM: 25.9
RHH5233_R3605
25.9
RHH5205_R3576
41.4
RHH5262_R3634
42.7
RHH5297_R3663
30.3
Memory CD4 T-cell TFH nTPM: 33.2
Samples: 4
Max nTPM: 43.9
Min nTPM: 27.5
RHH5300_R3666
28.0
RHH5236_R3608
43.9
RHH5265_R3637
33.4
RHH5208_R3579
27.5
Memory CD4 T-cell Th1 nTPM: 53.2
Samples: 4
Max nTPM: 75.1
Min nTPM: 18.0
RHH5210_R3581
18.0
RHH5302_R3668
51.5
RHH5238_R3610
75.1
RHH5267_R3639
68.3
Memory CD4 T-cell Th1/Th17 nTPM: 42.3
Samples: 4
Max nTPM: 58.2
Min nTPM: 31.6
RHH5303_R3669
33.8
RHH5211_R3582
31.6
RHH5239_R3611
45.5
RHH5268_R3640
58.2
Memory CD4 T-cell Th17 nTPM: 41.9
Samples: 4
Max nTPM: 56.3
Min nTPM: 21.4
RHH5304_R3670
56.3
RHH5212_R3583
21.4
RHH5240_R3612
54.6
RHH5269_R3641
35.2
Memory CD4 T-cell Th2 nTPM: 37.6
Samples: 4
Max nTPM: 64.0
Min nTPM: 21.9
RHH5305_R3671
64.0
RHH5213_R3584
21.9
RHH5241_R3613
26.3
RHH5270_R3642
38.2
Naive CD4 T-cell nTPM: 44.7
Samples: 4
Max nTPM: 61.4
Min nTPM: 26.4
RHH5306_R3672
61.4
RHH5214_R3585
39.4
RHH5242_R3614
26.4
RHH5271_R3643
51.4
Naive CD8 T-cell nTPM: 38.8
Samples: 4
Max nTPM: 67.9
Min nTPM: 24.3
RHH5201_R3572
24.3
RHH5229_R3601
67.9
RHH5258_R3630
26.3
RHH5287_R3659
36.5
Non-Vd2 gdTCR nTPM: 36.4
Samples: 4
Max nTPM: 45.9
Min nTPM: 28.8
RHH5235_R3607
37.8
RHH5264_R3636
28.8
RHH5207_R3578
45.9
RHH5299_R3665
32.9
T-reg nTPM: 42.6
Samples: 4
Max nTPM: 59.2
Min nTPM: 26.3
RHH5301_R3667
38.7
RHH5237_R3609
26.3
RHH5266_R3638
59.2
RHH5209_R3580
46.1
Terminal effector memory CD4 T-cell nTPM: 39.7
Samples: 2
Max nTPM: 57.0
Min nTPM: 22.3
RHH5243_R3615
57.0
RHH5272_R3644
22.3
Terminal effector memory CD8 T-cell nTPM: 48.1
Samples: 4
Max nTPM: 70.7
Min nTPM: 24.4
RHH5232_R3604
24.4
RHH5204_R3575
70.7
RHH5261_R3633
66.1
RHH5296_R3662
31.0
Vd2 gdTCR nTPM: 57.1
Samples: 4
Max nTPM: 100.9
Min nTPM: 23.7
RHH5234_R3606
23.7
RHH5206_R3577
100.9
RHH5263_R3635
69.5
RHH5298_R3664
34.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
