HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:35.7 nTPM
HPA Brain:34.2 nTPM
GTEx:35.7 nTPM
FANTOM5:85.1 Scaled Tags Per Million
Pig:65.5 nTPM
Mouse:230.1 nTPM
Allen mouse:3.6 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 34.2
Sample id Sample description nTPM
Hippocampus
nTPM: 30.4
1898 Male, age 80, left hemisphere 40.1
1855 Male, age 76, left hemisphere 32.7
1911 Female, age 85, right hemisphere 31.9
2621 Female, age 67, right hemisphere 28.7
2529 Female, age 94, left hemisphere 26.3
2148 Female, age 91, left hemisphere 22.9
Dentate gyrus
nTPM: 29.1
1927 Female, age 91, both hemispheres 36.7
2010 Male, age 76, both hemispheres 35.8
2246 Female, age 85, both hemispheres 28.4
2530 Female, age 94, left hemisphere 24.9
2531 Female, age 67, both hemispheres 24.4
2528 Male, age 74, both hemispheres 24.1
Entorhinal gyrus
nTPM: 25.4
1938 Female, age 85, left hemisphere 33.7
1787 Male, age 76, left hemisphere 29.2
2764 Male, age 80, right hemisphere 25.6
2613 Female, age 94, left hemisphere 22.0
2117 Female, age 91, right hemisphere 21.1
2686 Male, age 75, right hemisphere 21.1
Hippocampus, CA1
nTPM: 34.2
2749 Male, age 80, left hemisphere 43.6
1873 Female, age 85, both hemispheres 38.1
2045 Male, age 76, both hemispheres 37.0
2527 Male, age 74, both hemispheres 26.2
2082 Female, age 91, right hemisphere 26.0
Hippocampus, CA2
nTPM: 30.3
1892 Male, age 76, both hemispheres 39.5
1963 Male, age 80, left hemisphere 31.6
1940 Female, age 85, left hemisphere 31.1
2437 Female, age 94, left hemisphere 26.8
2249 Male, age 74, both hemispheres 26.6
2113 Female, age 91, right hemisphere 26.3
Hippocampus, CA3
nTPM: 31.8
1867 Male, age 76, both hemispheres 42.0
2137 Male, age 80, left hemisphere 38.7
1891 Female, age 85, both hemispheres 32.1
2620 Female, age 94, left hemisphere 27.8
2436 Male, age 74, both hemispheres 27.2
2861 Female, age 67, both hemispheres 23.3
Parahippocampal cortex
nTPM: 29.1
1850 Male, age 80, both hemispheres 42.2
2018 Male, age 76, both hemispheres 37.5
1990 Female, age 91, right hemisphere 30.8
2250 Female, age 67, right hemisphere 30.8
1933 Female, age 85, both hemispheres 27.7
2245 Female, age 91, both hemispheres 27.6
2693 Female, age 94, both hemispheres 26.8
2532 Female, age 72, left hemisphere 25.1
2692 Male, age 74, both hemispheres 23.2
2622 Female, age 67, right hemisphere 19.6
Perirhinal gyrus
nTPM: 33.4
1847 Female, age 91, left hemisphere 38.8
1841 Female, age 85, right hemisphere 37.7
1794 Male, age 80, right hemisphere 32.9
2521 Female, age 94, right hemisphere 29.0
2848 Male, age 76, right hemisphere 28.4
Subiculum
nTPM: 26.9
1901 Male, age 80, both hemispheres 32.3
2042 Male, age 76, both hemispheres 31.8
1977 Female, age 85, both hemispheres 30.5
2438 Female, age 94, left hemisphere 24.0
2619 Male, age 74, both hemispheres 21.7
2729 Female, age 91, right hemisphere 20.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 35.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 35.7
Samples: 197

Max nTPM: 70.4
Min nTPM: 14.6
Std nTPM: 10.5
Median nTPM: 34.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 70.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 69.8
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 63.0
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 61.8
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 57.0
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 55.7
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 54.1
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 53.5
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 53.0
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 52.4
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 51.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 85.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 85.1
FF:10169-103B7 60 years, female 110.0
FF:10153-102I9 76 years, female 60.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 65.5
Pig sample Sample description nTPM
Subiculum
nTPM: 61.0
Samples: 4

Max nTPM: 76.7
Min nTPM: 54.6
Sample A Female 76.7
Sample B Female 54.6
Sample C Male 55.4
Sample D Male 57.4
Dorsal hippocampus
nTPM: 65.5
Samples: 4

Max nTPM: 78.1
Min nTPM: 51.8
Sample A Female 78.1
Sample B Female 62.9
Sample C Male 69.0
Sample D Male 51.8
Entorhinal cortex
nTPM: 57.1
Samples: 4

Max nTPM: 65.0
Min nTPM: 51.2
Sample A Female 54.2
Sample B Female 65.0
Sample C Male 58.1
Sample D Male 51.2
Ventral hippocampus
nTPM: 57.6
Samples: 4

Max nTPM: 65.3
Min nTPM: 50.7
Sample A Female 65.3
Sample B Female 50.7
Sample C Male 53.9
Sample D Male 60.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 230.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 218.0
Samples: 4

Max nTPM: 240.3
Min nTPM: 190.1
Sample A Male 190.1
Sample B Male 240.3
Sample C Female 228.0
Sample D Female 213.5
Hippocampal formation
nTPM: 230.1
Samples: 4

Max nTPM: 264.9
Min nTPM: 206.7
Sample A Male 264.9
Sample B Male 220.7
Sample C Female 206.7
Sample D Female 228.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.6
70194498 Antisense, RP_050517_01_E06, Mouse strain C57BL/6J (56 days, male) 5.0
74750009 Antisense, RP_060220_04_F11, Mouse strain C57BL/6J (56 days, male) 2.3

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