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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
52.2
nTPM
Monaco:
160.8
nTPM
Schmiedel:
133.8
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
52.2
HPA sample
nTPM
gdT-cell nTPM: 32.4
Samples: 6
Max nTPM: 50.4
Min nTPM: 21.6
P10809_1007
21.6
P10809_1022
28.4
P10809_1041
22.5
P10809_1060
29.7
P10809_1077
50.4
P10809_1098
41.9
MAIT T-cell nTPM: 29.5
Samples: 6
Max nTPM: 47.0
Min nTPM: 21.3
P10809_1006
23.8
P10809_1024
26.0
P10809_1043
21.3
P10809_1062
30.8
P10809_1083
47.0
P10809_1097
28.3
Memory CD4 T-cell nTPM: 40.0
Samples: 6
Max nTPM: 60.7
Min nTPM: 27.1
P10809_1014
37.2
P10809_1026
27.1
P10809_1045
27.1
P10809_1064
39.2
P10809_1086
60.7
P10809_1113
48.7
Memory CD8 T-cell nTPM: 32.4
Samples: 5
Max nTPM: 41.6
Min nTPM: 24.5
P10809_1012
25.2
P10809_1027
34.3
P10809_1046
24.5
P10809_1065
36.5
P10809_1111
41.6
Naive CD4 T-cell nTPM: 49.6
Samples: 6
Max nTPM: 67.9
Min nTPM: 33.2
P10809_1015
57.4
P10809_1030
35.8
P10809_1049
33.2
P10809_1068
47.6
P10809_1085
67.9
P10809_1112
55.4
Naive CD8 T-cell nTPM: 42.1
Samples: 6
Max nTPM: 59.8
Min nTPM: 28.2
P10809_1016
40.7
P10809_1031
48.2
P10809_1050
28.2
P10809_1069
28.9
P10809_1087
59.8
P10809_1110
46.8
T-reg nTPM: 52.2
Samples: 6
Max nTPM: 69.1
Min nTPM: 33.6
P10809_1018
44.2
P10809_1037
54.3
P10809_1056
33.6
P10809_1075
48.5
P10809_1094
63.3
P10809_1106
69.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
160.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 123.1
Samples: 4
Max nTPM: 158.8
Min nTPM: 104.0
RHH5202_R3573
104.0
RHH5230_R3602
111.8
RHH5259_R3631
117.9
RHH5288_R3660
158.8
Effector memory CD8 T-cell nTPM: 133.1
Samples: 4
Max nTPM: 171.0
Min nTPM: 98.7
RHH5203_R3574
98.7
RHH5231_R3603
171.0
RHH5260_R3632
142.7
RHH5289_R3661
120.1
MAIT T-cell nTPM: 128.3
Samples: 4
Max nTPM: 167.1
Min nTPM: 83.3
RHH5233_R3605
130.9
RHH5205_R3576
83.3
RHH5262_R3634
131.8
RHH5297_R3663
167.1
Memory CD4 T-cell TFH nTPM: 150.5
Samples: 4
Max nTPM: 189.2
Min nTPM: 113.5
RHH5300_R3666
143.5
RHH5236_R3608
189.2
RHH5265_R3637
155.7
RHH5208_R3579
113.5
Memory CD4 T-cell Th1 nTPM: 149.4
Samples: 4
Max nTPM: 217.0
Min nTPM: 111.3
RHH5210_R3581
147.2
RHH5302_R3668
217.0
RHH5238_R3610
111.3
RHH5267_R3639
122.1
Memory CD4 T-cell Th1/Th17 nTPM: 129.8
Samples: 4
Max nTPM: 188.8
Min nTPM: 92.3
RHH5303_R3669
188.8
RHH5211_R3582
115.7
RHH5239_R3611
92.3
RHH5268_R3640
122.4
Memory CD4 T-cell Th17 nTPM: 111.7
Samples: 4
Max nTPM: 122.8
Min nTPM: 103.8
RHH5304_R3670
106.3
RHH5212_R3583
113.7
RHH5240_R3612
122.8
RHH5269_R3641
103.8
Memory CD4 T-cell Th2 nTPM: 133.5
Samples: 4
Max nTPM: 158.5
Min nTPM: 105.3
RHH5305_R3671
142.2
RHH5213_R3584
105.3
RHH5241_R3613
158.5
RHH5270_R3642
128.1
Naive CD4 T-cell nTPM: 144.4
Samples: 4
Max nTPM: 149.6
Min nTPM: 136.1
RHH5306_R3672
148.3
RHH5214_R3585
149.6
RHH5242_R3614
143.7
RHH5271_R3643
136.1
Naive CD8 T-cell nTPM: 126.8
Samples: 4
Max nTPM: 167.9
Min nTPM: 101.1
RHH5201_R3572
101.1
RHH5229_R3601
105.1
RHH5258_R3630
167.9
RHH5287_R3659
133.0
Non-Vd2 gdTCR nTPM: 140.8
Samples: 4
Max nTPM: 196.8
Min nTPM: 116.4
RHH5235_R3607
122.0
RHH5264_R3636
196.8
RHH5207_R3578
116.4
RHH5299_R3665
127.8
T-reg nTPM: 157.6
Samples: 4
Max nTPM: 190.2
Min nTPM: 139.3
RHH5301_R3667
190.2
RHH5237_R3609
160.6
RHH5266_R3638
139.3
RHH5209_R3580
140.2
Terminal effector memory CD4 T-cell nTPM: 160.8
Samples: 2
Max nTPM: 212.4
Min nTPM: 109.1
RHH5243_R3615
109.1
RHH5272_R3644
212.4
Terminal effector memory CD8 T-cell nTPM: 149.5
Samples: 4
Max nTPM: 174.2
Min nTPM: 140.3
RHH5232_R3604
140.4
RHH5204_R3575
174.2
RHH5261_R3633
140.3
RHH5296_R3662
143.1
Vd2 gdTCR nTPM: 156.5
Samples: 4
Max nTPM: 177.5
Min nTPM: 139.3
RHH5234_R3606
139.3
RHH5206_R3577
177.5
RHH5263_R3635
149.9
RHH5298_R3664
159.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
