HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:129.0 nTPM
HPA Brain:114.5 nTPM
GTEx:129.0 nTPM
FANTOM5:80.7 Scaled Tags Per Million
Pig:39.6 nTPM
Mouse:52.0 nTPM
Allen mouse:10.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038560
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 114.5
Sample id Sample description nTPM
Hippocampus
nTPM: 103.1
2621 Female, age 67, right hemisphere 121.4
2148 Female, age 91, left hemisphere 115.9
1898 Male, age 80, left hemisphere 103.5
1911 Female, age 85, right hemisphere 97.4
1855 Male, age 76, left hemisphere 96.7
2529 Female, age 94, left hemisphere 83.9
Dentate gyrus
nTPM: 96.2
2531 Female, age 67, both hemispheres 117.6
1927 Female, age 91, both hemispheres 104.1
2010 Male, age 76, both hemispheres 93.9
2528 Male, age 74, both hemispheres 93.3
2530 Female, age 94, left hemisphere 85.2
2246 Female, age 85, both hemispheres 83.0
Entorhinal gyrus
nTPM: 104.5
2613 Female, age 94, left hemisphere 131.6
2764 Male, age 80, right hemisphere 128.2
1938 Female, age 85, left hemisphere 103.6
2686 Male, age 75, right hemisphere 93.5
1787 Male, age 76, left hemisphere 87.2
2117 Female, age 91, right hemisphere 82.8
Hippocampus, CA1
nTPM: 112.1
2749 Male, age 80, left hemisphere 142.6
2045 Male, age 76, both hemispheres 123.2
1873 Female, age 85, both hemispheres 106.2
2082 Female, age 91, right hemisphere 96.2
2527 Male, age 74, both hemispheres 92.4
Hippocampus, CA2
nTPM: 97.8
1940 Female, age 85, left hemisphere 117.3
2249 Male, age 74, both hemispheres 111.3
1892 Male, age 76, both hemispheres 101.7
1963 Male, age 80, left hemisphere 97.3
2437 Female, age 94, left hemisphere 79.9
2113 Female, age 91, right hemisphere 79.3
Hippocampus, CA3
nTPM: 114.5
2620 Female, age 94, left hemisphere 165.6
2137 Male, age 80, left hemisphere 122.6
1867 Male, age 76, both hemispheres 118.0
2861 Female, age 67, both hemispheres 115.9
1891 Female, age 85, both hemispheres 86.9
2436 Male, age 74, both hemispheres 77.8
Parahippocampal cortex
nTPM: 94.0
2622 Female, age 67, right hemisphere 125.8
2018 Male, age 76, both hemispheres 117.1
1990 Female, age 91, right hemisphere 97.5
1933 Female, age 85, both hemispheres 93.6
2532 Female, age 72, left hemisphere 90.2
2245 Female, age 91, both hemispheres 90.0
2693 Female, age 94, both hemispheres 86.7
1850 Male, age 80, both hemispheres 84.6
2692 Male, age 74, both hemispheres 81.9
2250 Female, age 67, right hemisphere 72.2
Perirhinal gyrus
nTPM: 85.8
2521 Female, age 94, right hemisphere 91.5
1794 Male, age 80, right hemisphere 90.5
1847 Female, age 91, left hemisphere 88.7
2848 Male, age 76, right hemisphere 82.3
1841 Female, age 85, right hemisphere 76.2
Subiculum
nTPM: 98.6
1901 Male, age 80, both hemispheres 124.0
2729 Female, age 91, right hemisphere 102.2
1977 Female, age 85, both hemispheres 98.9
2042 Male, age 76, both hemispheres 97.6
2619 Male, age 74, both hemispheres 94.9
2438 Female, age 94, left hemisphere 74.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 129.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 129.0
Samples: 197

Max nTPM: 303.0
Min nTPM: 33.8
Std nTPM: 46.9
Median nTPM: 123.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 303.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 288.9
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 245.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 238.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 237.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 233.6
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 228.0
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 227.0
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 221.1
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 212.9
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 209.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 80.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 80.7
FF:10153-102I9 76 years, female 84.7
FF:10169-103B7 60 years, female 76.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 39.6
Pig sample Sample description nTPM
Subiculum
nTPM: 37.0
Samples: 4

Max nTPM: 49.6
Min nTPM: 29.3
Sample A Female 49.6
Sample B Female 33.3
Sample C Male 35.6
Sample D Male 29.3
Dorsal hippocampus
nTPM: 37.1
Samples: 4

Max nTPM: 45.2
Min nTPM: 30.2
Sample A Female 45.2
Sample B Female 37.2
Sample C Male 35.7
Sample D Male 30.2
Entorhinal cortex
nTPM: 39.6
Samples: 4

Max nTPM: 42.9
Min nTPM: 37.2
Sample A Female 42.9
Sample B Female 40.1
Sample C Male 38.2
Sample D Male 37.2
Ventral hippocampus
nTPM: 38.9
Samples: 4

Max nTPM: 48.9
Min nTPM: 27.0
Sample A Female 41.0
Sample B Female 27.0
Sample C Male 48.9
Sample D Male 38.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 52.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 47.9
Samples: 4

Max nTPM: 50.9
Min nTPM: 41.4
Sample A Male 50.9
Sample B Male 50.1
Sample C Female 41.4
Sample D Female 49.1
Hippocampal formation
nTPM: 52.0
Samples: 4

Max nTPM: 55.3
Min nTPM: 45.8
Sample A Male 45.8
Sample B Male 53.9
Sample C Female 53.0
Sample D Female 55.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.7
74658111 Antisense, RP_060220_02_C07, Mouse strain C57BL/6J (56 days, male) 12.9
671251 Antisense, RP_040914_02_B10, Mouse strain C57BL/6J (56 days, male) 8.4

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