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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
125.0
nTPM
Monaco:
35.9
nTPM
Schmiedel:
505.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
125.0
HPA sample
nTPM
gdT-cell nTPM: 125.0
Samples: 6
Max nTPM: 192.0
Min nTPM: 64.4
P10809_1007
103.8
P10809_1022
64.4
P10809_1041
192.0
P10809_1060
117.7
P10809_1077
174.9
P10809_1098
97.3
MAIT T-cell nTPM: 119.6
Samples: 6
Max nTPM: 190.6
Min nTPM: 89.8
P10809_1006
89.8
P10809_1024
97.5
P10809_1043
190.6
P10809_1062
131.7
P10809_1083
110.5
P10809_1097
97.4
Memory CD4 T-cell nTPM: 100.4
Samples: 6
Max nTPM: 134.5
Min nTPM: 65.8
P10809_1014
96.5
P10809_1026
109.4
P10809_1045
128.4
P10809_1064
134.5
P10809_1086
67.6
P10809_1113
65.8
Memory CD8 T-cell nTPM: 89.6
Samples: 5
Max nTPM: 110.0
Min nTPM: 52.2
P10809_1012
84.5
P10809_1027
101.7
P10809_1046
99.5
P10809_1065
110.0
P10809_1111
52.2
Naive CD4 T-cell nTPM: 80.8
Samples: 6
Max nTPM: 149.0
Min nTPM: 22.6
P10809_1015
60.0
P10809_1030
98.2
P10809_1049
149.0
P10809_1068
64.4
P10809_1085
90.8
P10809_1112
22.6
Naive CD8 T-cell nTPM: 89.5
Samples: 6
Max nTPM: 139.1
Min nTPM: 33.2
P10809_1016
98.2
P10809_1031
97.7
P10809_1050
139.1
P10809_1069
86.2
P10809_1087
82.6
P10809_1110
33.2
T-reg nTPM: 109.4
Samples: 6
Max nTPM: 169.8
Min nTPM: 72.0
P10809_1018
93.8
P10809_1037
72.0
P10809_1056
169.8
P10809_1075
103.8
P10809_1094
134.8
P10809_1106
82.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
35.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 29.5
Samples: 4
Max nTPM: 36.2
Min nTPM: 23.3
RHH5202_R3573
25.5
RHH5230_R3602
23.3
RHH5259_R3631
36.2
RHH5288_R3660
33.0
Effector memory CD8 T-cell nTPM: 33.9
Samples: 4
Max nTPM: 63.0
Min nTPM: 13.2
RHH5203_R3574
63.0
RHH5231_R3603
13.2
RHH5260_R3632
25.7
RHH5289_R3661
33.5
MAIT T-cell nTPM: 26.9
Samples: 4
Max nTPM: 39.8
Min nTPM: 17.2
RHH5233_R3605
24.1
RHH5205_R3576
26.5
RHH5262_R3634
17.2
RHH5297_R3663
39.8
Memory CD4 T-cell TFH nTPM: 17.1
Samples: 4
Max nTPM: 29.3
Min nTPM: 8.8
RHH5300_R3666
8.8
RHH5236_R3608
29.3
RHH5265_R3637
17.3
RHH5208_R3579
12.9
Memory CD4 T-cell Th1 nTPM: 25.2
Samples: 4
Max nTPM: 34.8
Min nTPM: 14.5
RHH5210_R3581
14.5
RHH5302_R3668
29.8
RHH5238_R3610
21.6
RHH5267_R3639
34.8
Memory CD4 T-cell Th1/Th17 nTPM: 23.7
Samples: 4
Max nTPM: 31.4
Min nTPM: 11.6
RHH5303_R3669
21.3
RHH5211_R3582
31.4
RHH5239_R3611
11.6
RHH5268_R3640
30.4
Memory CD4 T-cell Th17 nTPM: 16.3
Samples: 4
Max nTPM: 21.5
Min nTPM: 9.9
RHH5304_R3670
19.5
RHH5212_R3583
21.5
RHH5240_R3612
9.9
RHH5269_R3641
14.4
Memory CD4 T-cell Th2 nTPM: 21.3
Samples: 4
Max nTPM: 24.4
Min nTPM: 15.0
RHH5305_R3671
24.4
RHH5213_R3584
23.3
RHH5241_R3613
15.0
RHH5270_R3642
22.5
Naive CD4 T-cell nTPM: 27.7
Samples: 4
Max nTPM: 34.2
Min nTPM: 16.0
RHH5306_R3672
31.2
RHH5214_R3585
34.2
RHH5242_R3614
29.5
RHH5271_R3643
16.0
Naive CD8 T-cell nTPM: 27.2
Samples: 4
Max nTPM: 29.9
Min nTPM: 23.0
RHH5201_R3572
23.0
RHH5229_R3601
26.4
RHH5258_R3630
29.4
RHH5287_R3659
29.9
Non-Vd2 gdTCR nTPM: 27.0
Samples: 4
Max nTPM: 30.2
Min nTPM: 24.1
RHH5235_R3607
30.2
RHH5264_R3636
24.1
RHH5207_R3578
24.8
RHH5299_R3665
28.8
T-reg nTPM: 23.0
Samples: 4
Max nTPM: 29.8
Min nTPM: 17.2
RHH5301_R3667
22.9
RHH5237_R3609
22.0
RHH5266_R3638
29.8
RHH5209_R3580
17.2
Terminal effector memory CD4 T-cell nTPM: 27.2
Samples: 2
Max nTPM: 29.9
Min nTPM: 24.5
RHH5243_R3615
24.5
RHH5272_R3644
29.9
Terminal effector memory CD8 T-cell nTPM: 35.9
Samples: 4
Max nTPM: 53.6
Min nTPM: 26.6
RHH5232_R3604
29.3
RHH5204_R3575
26.6
RHH5261_R3633
34.2
RHH5296_R3662
53.6
Vd2 gdTCR nTPM: 28.3
Samples: 4
Max nTPM: 34.1
Min nTPM: 21.0
RHH5234_R3606
21.0
RHH5206_R3577
29.9
RHH5263_R3635
34.1
RHH5298_R3664
28.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
