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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
92.2
nTPM
Monaco:
27.7
nTPM
Schmiedel:
71.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
92.2
HPA sample
nTPM
gdT-cell nTPM: 78.5
Samples: 6
Max nTPM: 96.0
Min nTPM: 57.1
P10809_1007
57.1
P10809_1022
74.0
P10809_1041
96.0
P10809_1060
71.2
P10809_1077
82.2
P10809_1098
90.7
MAIT T-cell nTPM: 76.4
Samples: 6
Max nTPM: 107.3
Min nTPM: 45.2
P10809_1006
48.9
P10809_1024
95.9
P10809_1043
72.4
P10809_1062
88.5
P10809_1083
45.2
P10809_1097
107.3
Memory CD4 T-cell nTPM: 71.5
Samples: 6
Max nTPM: 80.4
Min nTPM: 62.3
P10809_1014
62.3
P10809_1026
68.9
P10809_1045
64.8
P10809_1064
75.1
P10809_1086
77.7
P10809_1113
80.4
Memory CD8 T-cell nTPM: 77.3
Samples: 5
Max nTPM: 100.7
Min nTPM: 52.0
P10809_1012
52.0
P10809_1027
100.7
P10809_1046
75.0
P10809_1065
70.1
P10809_1111
88.7
Naive CD4 T-cell nTPM: 76.2
Samples: 6
Max nTPM: 95.8
Min nTPM: 48.8
P10809_1015
48.8
P10809_1030
82.2
P10809_1049
95.8
P10809_1068
75.2
P10809_1085
76.1
P10809_1112
79.2
Naive CD8 T-cell nTPM: 80.6
Samples: 6
Max nTPM: 104.8
Min nTPM: 61.4
P10809_1016
61.4
P10809_1031
104.8
P10809_1050
69.5
P10809_1069
76.6
P10809_1087
90.7
P10809_1110
80.3
T-reg nTPM: 92.2
Samples: 6
Max nTPM: 110.8
Min nTPM: 62.7
P10809_1018
62.7
P10809_1037
81.6
P10809_1056
110.8
P10809_1075
106.9
P10809_1094
91.7
P10809_1106
99.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
27.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 17.3
Samples: 4
Max nTPM: 25.5
Min nTPM: 7.9
RHH5202_R3573
13.4
RHH5230_R3602
7.9
RHH5259_R3631
22.4
RHH5288_R3660
25.5
Effector memory CD8 T-cell nTPM: 15.3
Samples: 4
Max nTPM: 23.3
Min nTPM: 7.4
RHH5203_R3574
23.3
RHH5231_R3603
11.1
RHH5260_R3632
19.4
RHH5289_R3661
7.4
MAIT T-cell nTPM: 22.1
Samples: 4
Max nTPM: 30.1
Min nTPM: 14.9
RHH5233_R3605
14.9
RHH5205_R3576
17.0
RHH5262_R3634
30.1
RHH5297_R3663
26.5
Memory CD4 T-cell TFH nTPM: 24.3
Samples: 4
Max nTPM: 35.9
Min nTPM: 19.1
RHH5300_R3666
19.4
RHH5236_R3608
35.9
RHH5265_R3637
19.1
RHH5208_R3579
22.7
Memory CD4 T-cell Th1 nTPM: 22.5
Samples: 4
Max nTPM: 29.6
Min nTPM: 16.3
RHH5210_R3581
16.3
RHH5302_R3668
29.6
RHH5238_R3610
23.0
RHH5267_R3639
20.9
Memory CD4 T-cell Th1/Th17 nTPM: 17.9
Samples: 4
Max nTPM: 21.7
Min nTPM: 11.2
RHH5303_R3669
20.1
RHH5211_R3582
18.6
RHH5239_R3611
11.2
RHH5268_R3640
21.7
Memory CD4 T-cell Th17 nTPM: 20.7
Samples: 4
Max nTPM: 24.3
Min nTPM: 18.6
RHH5304_R3670
18.6
RHH5212_R3583
19.8
RHH5240_R3612
20.2
RHH5269_R3641
24.3
Memory CD4 T-cell Th2 nTPM: 20.0
Samples: 4
Max nTPM: 23.3
Min nTPM: 16.7
RHH5305_R3671
23.3
RHH5213_R3584
20.7
RHH5241_R3613
19.2
RHH5270_R3642
16.7
Naive CD4 T-cell nTPM: 26.8
Samples: 4
Max nTPM: 43.5
Min nTPM: 17.5
RHH5306_R3672
20.8
RHH5214_R3585
43.5
RHH5242_R3614
17.5
RHH5271_R3643
25.3
Naive CD8 T-cell nTPM: 19.1
Samples: 4
Max nTPM: 28.7
Min nTPM: 14.7
RHH5201_R3572
15.7
RHH5229_R3601
17.1
RHH5258_R3630
28.7
RHH5287_R3659
14.7
Non-Vd2 gdTCR nTPM: 20.6
Samples: 4
Max nTPM: 34.0
Min nTPM: 14.0
RHH5235_R3607
15.4
RHH5264_R3636
19.1
RHH5207_R3578
14.0
RHH5299_R3665
34.0
T-reg nTPM: 27.8
Samples: 4
Max nTPM: 44.2
Min nTPM: 14.3
RHH5301_R3667
44.2
RHH5237_R3609
28.2
RHH5266_R3638
14.3
RHH5209_R3580
24.3
Terminal effector memory CD4 T-cell nTPM: 17.3
Samples: 2
Max nTPM: 21.7
Min nTPM: 12.9
RHH5243_R3615
12.9
RHH5272_R3644
21.7
Terminal effector memory CD8 T-cell nTPM: 26.4
Samples: 4
Max nTPM: 52.5
Min nTPM: 13.5
RHH5232_R3604
17.3
RHH5204_R3575
52.5
RHH5261_R3633
22.3
RHH5296_R3662
13.5
Vd2 gdTCR nTPM: 24.6
Samples: 4
Max nTPM: 40.6
Min nTPM: 14.2
RHH5234_R3606
14.2
RHH5206_R3577
40.6
RHH5263_R3635
15.7
RHH5298_R3664
27.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
