HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:10.5 nTPM
HPA Brain:14.1 nTPM
GTEx:10.5 nTPM
FANTOM5:10.2 Scaled Tags Per Million
Pig:6.4 nTPM
Mouse:9.5 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA020427Antibody HPA024158Antibody HPA024585
Glial cells Not detectedNot detectedLow
Neuronal cells LowNot detectedNot detected






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 14.1
Sample id Sample description nTPM
Hippocampus
nTPM: 13.3
1898 Male, age 80, left hemisphere 14.7
2529 Female, age 94, left hemisphere 14.4
2148 Female, age 91, left hemisphere 13.7
1855 Male, age 76, left hemisphere 13.0
1911 Female, age 85, right hemisphere 12.6
2621 Female, age 67, right hemisphere 11.6
Dentate gyrus
nTPM: 13.5
2528 Male, age 74, both hemispheres 16.9
2010 Male, age 76, both hemispheres 14.6
2246 Female, age 85, both hemispheres 13.8
2531 Female, age 67, both hemispheres 12.3
1927 Female, age 91, both hemispheres 12.0
2530 Female, age 94, left hemisphere 11.4
Entorhinal gyrus
nTPM: 13.8
2117 Female, age 91, right hemisphere 15.4
2764 Male, age 80, right hemisphere 15.3
1938 Female, age 85, left hemisphere 14.4
1787 Male, age 76, left hemisphere 13.7
2613 Female, age 94, left hemisphere 12.2
2686 Male, age 75, right hemisphere 11.7
Hippocampus, CA1
nTPM: 14.1
2082 Female, age 91, right hemisphere 16.3
2749 Male, age 80, left hemisphere 15.2
2527 Male, age 74, both hemispheres 14.5
1873 Female, age 85, both hemispheres 12.4
2045 Male, age 76, both hemispheres 12.0
Hippocampus, CA2
nTPM: 13.3
2249 Male, age 74, both hemispheres 17.6
2113 Female, age 91, right hemisphere 15.1
1940 Female, age 85, left hemisphere 13.6
1963 Male, age 80, left hemisphere 11.7
2437 Female, age 94, left hemisphere 11.2
1892 Male, age 76, both hemispheres 10.3
Hippocampus, CA3
nTPM: 13.4
2436 Male, age 74, both hemispheres 15.1
2137 Male, age 80, left hemisphere 14.5
2620 Female, age 94, left hemisphere 14.3
1891 Female, age 85, both hemispheres 12.4
1867 Male, age 76, both hemispheres 12.1
2861 Female, age 67, both hemispheres 12.0
Parahippocampal cortex
nTPM: 12.7
2250 Female, age 67, right hemisphere 14.9
1933 Female, age 85, both hemispheres 14.6
1990 Female, age 91, right hemisphere 14.3
2018 Male, age 76, both hemispheres 13.5
1850 Male, age 80, both hemispheres 12.7
2245 Female, age 91, both hemispheres 12.3
2693 Female, age 94, both hemispheres 11.9
2692 Male, age 74, both hemispheres 11.5
2622 Female, age 67, right hemisphere 11.3
2532 Female, age 72, left hemisphere 9.5
Perirhinal gyrus
nTPM: 13.5
1847 Female, age 91, left hemisphere 15.0
1794 Male, age 80, right hemisphere 14.5
1841 Female, age 85, right hemisphere 13.9
2521 Female, age 94, right hemisphere 13.0
2848 Male, age 76, right hemisphere 11.0
Subiculum
nTPM: 13.6
2729 Female, age 91, right hemisphere 15.7
2619 Male, age 74, both hemispheres 14.8
1977 Female, age 85, both hemispheres 14.2
2438 Female, age 94, left hemisphere 13.0
2042 Male, age 76, both hemispheres 12.1
1901 Male, age 80, both hemispheres 11.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.5
Samples: 197

Max nTPM: 19.3
Min nTPM: 3.8
Std nTPM: 2.6
Median nTPM: 10.5
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 19.3
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 18.1
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 17.1
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 16.8
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 16.4
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 16.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 16.2
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 15.3
GTEX-ZDXO-0011-R1a-SM-4WKF4 60-69 years, male 14.9
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 14.7
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 14.7
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 10.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 10.2
FF:10169-103B7 60 years, female 10.3
FF:10153-102I9 76 years, female 10.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 6.4
Pig sample Sample description nTPM
Subiculum
nTPM: 6.4
Samples: 4

Max nTPM: 6.7
Min nTPM: 5.9
Sample A Female 5.9
Sample B Female 6.7
Sample C Male 6.6
Sample D Male 6.3
Dorsal hippocampus
nTPM: 4.9
Samples: 4

Max nTPM: 5.8
Min nTPM: 4.0
Sample A Female 4.0
Sample B Female 5.2
Sample C Male 4.5
Sample D Male 5.8
Entorhinal cortex
nTPM: 5.8
Samples: 4

Max nTPM: 6.2
Min nTPM: 5.4
Sample A Female 5.7
Sample B Female 5.8
Sample C Male 5.4
Sample D Male 6.2
Ventral hippocampus
nTPM: 5.5
Samples: 4

Max nTPM: 6.5
Min nTPM: 4.6
Sample A Female 5.7
Sample B Female 6.5
Sample C Male 5.0
Sample D Male 4.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 9.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.4
Samples: 4

Max nTPM: 10.8
Min nTPM: 7.4
Sample A Male 7.4
Sample B Male 9.1
Sample C Female 10.8
Sample D Female 10.1
Hippocampal formation
nTPM: 9.5
Samples: 4

Max nTPM: 11.0
Min nTPM: 6.8
Sample A Male 11.0
Sample B Male 9.5
Sample C Female 6.8
Sample D Female 10.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
69838764 Antisense, RP_050324_02_F02, Mouse strain C57BL/6J (56 days, male) 0.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org