HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:10.2 nTPM
HPA Brain:35.9 nTPM
GTEx:10.2 nTPM
FANTOM5:33.3 Scaled Tags Per Million
Pig:58.5 nTPM
Mouse:38.0 nTPM
Allen mouse:3.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 35.9
Sample id Sample description nTPM
Hippocampus
nTPM: 35.5
2621 Female, age 67, right hemisphere 41.1
2529 Female, age 94, left hemisphere 38.6
2148 Female, age 91, left hemisphere 36.0
1911 Female, age 85, right hemisphere 33.7
1855 Male, age 76, left hemisphere 32.1
1898 Male, age 80, left hemisphere 31.7
Dentate gyrus
nTPM: 34.2
2531 Female, age 67, both hemispheres 39.7
2530 Female, age 94, left hemisphere 35.4
1927 Female, age 91, both hemispheres 34.9
2246 Female, age 85, both hemispheres 33.5
2528 Male, age 74, both hemispheres 31.4
2010 Male, age 76, both hemispheres 30.4
Entorhinal gyrus
nTPM: 34.9
2686 Male, age 75, right hemisphere 39.4
2764 Male, age 80, right hemisphere 37.1
2613 Female, age 94, left hemisphere 36.7
1787 Male, age 76, left hemisphere 33.1
1938 Female, age 85, left hemisphere 32.6
2117 Female, age 91, right hemisphere 30.7
Hippocampus, CA1
nTPM: 34.6
2527 Male, age 74, both hemispheres 36.0
1873 Female, age 85, both hemispheres 35.5
2749 Male, age 80, left hemisphere 35.3
2082 Female, age 91, right hemisphere 34.3
2045 Male, age 76, both hemispheres 32.0
Hippocampus, CA2
nTPM: 33.5
1963 Male, age 80, left hemisphere 37.4
2437 Female, age 94, left hemisphere 34.9
2113 Female, age 91, right hemisphere 34.7
1940 Female, age 85, left hemisphere 32.9
1892 Male, age 76, both hemispheres 31.6
2249 Male, age 74, both hemispheres 29.7
Hippocampus, CA3
nTPM: 35.9
2861 Female, age 67, both hemispheres 46.2
2620 Female, age 94, left hemisphere 41.0
2137 Male, age 80, left hemisphere 37.9
1891 Female, age 85, both hemispheres 31.3
1867 Male, age 76, both hemispheres 30.0
2436 Male, age 74, both hemispheres 29.3
Parahippocampal cortex
nTPM: 35.8
2622 Female, age 67, right hemisphere 41.9
2245 Female, age 91, both hemispheres 40.4
2693 Female, age 94, both hemispheres 38.3
2692 Male, age 74, both hemispheres 36.3
2532 Female, age 72, left hemisphere 35.5
2250 Female, age 67, right hemisphere 34.4
1850 Male, age 80, both hemispheres 33.8
1933 Female, age 85, both hemispheres 33.3
2018 Male, age 76, both hemispheres 32.6
1990 Female, age 91, right hemisphere 31.3
Perirhinal gyrus
nTPM: 35.8
2521 Female, age 94, right hemisphere 37.8
1847 Female, age 91, left hemisphere 35.6
2848 Male, age 76, right hemisphere 35.3
1794 Male, age 80, right hemisphere 35.1
1841 Female, age 85, right hemisphere 35.1
Subiculum
nTPM: 32.8
2619 Male, age 74, both hemispheres 35.8
2729 Female, age 91, right hemisphere 34.2
2438 Female, age 94, left hemisphere 33.5
2042 Male, age 76, both hemispheres 31.1
1977 Female, age 85, both hemispheres 31.0
1901 Male, age 80, both hemispheres 30.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.2
Samples: 197

Max nTPM: 20.2
Min nTPM: 4.6
Std nTPM: 2.2
Median nTPM: 10.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 20.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 17.6
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 16.2
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 15.9
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 15.7
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 14.8
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 14.6
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 14.5
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 14.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 14.4
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 14.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 33.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 33.3
FF:10153-102I9 76 years, female 36.5
FF:10169-103B7 60 years, female 30.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 58.5
Pig sample Sample description nTPM
Subiculum
nTPM: 52.6
Samples: 4

Max nTPM: 59.7
Min nTPM: 45.6
Sample A Female 59.7
Sample B Female 52.2
Sample C Male 52.8
Sample D Male 45.6
Dorsal hippocampus
nTPM: 49.0
Samples: 4

Max nTPM: 51.6
Min nTPM: 46.4
Sample A Female 51.6
Sample B Female 50.4
Sample C Male 46.4
Sample D Male 47.7
Entorhinal cortex
nTPM: 58.4
Samples: 4

Max nTPM: 62.5
Min nTPM: 55.0
Sample A Female 60.3
Sample B Female 55.9
Sample C Male 62.5
Sample D Male 55.0
Ventral hippocampus
nTPM: 50.2
Samples: 4

Max nTPM: 56.8
Min nTPM: 45.3
Sample A Female 45.3
Sample B Female 45.6
Sample C Male 56.8
Sample D Male 53.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 38.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 38.0
Samples: 4

Max nTPM: 41.2
Min nTPM: 35.6
Sample A Male 37.8
Sample B Male 37.5
Sample C Female 35.6
Sample D Female 41.2
Hippocampal formation
nTPM: 33.2
Samples: 4

Max nTPM: 34.8
Min nTPM: 31.1
Sample A Male 33.2
Sample B Male 34.8
Sample C Female 33.5
Sample D Female 31.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.3
68157417 Antisense, RP_041116_02_F10, Mouse strain C57BL/6J (56 days, male) 3.3

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