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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
204.2
nTPM
Monaco:
24.2
nTPM
Schmiedel:
32.7
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
204.2
HPA sample
nTPM
gdT-cell nTPM: 153.9
Samples: 6
Max nTPM: 195.0
Min nTPM: 121.0
P10809_1007
121.0
P10809_1022
154.3
P10809_1041
195.0
P10809_1060
128.4
P10809_1077
183.2
P10809_1098
141.6
MAIT T-cell nTPM: 99.7
Samples: 6
Max nTPM: 118.1
Min nTPM: 67.4
P10809_1006
67.4
P10809_1024
108.2
P10809_1043
107.8
P10809_1062
98.7
P10809_1083
97.8
P10809_1097
118.1
Memory CD4 T-cell nTPM: 141.1
Samples: 6
Max nTPM: 174.6
Min nTPM: 87.8
P10809_1014
87.8
P10809_1026
157.8
P10809_1045
157.0
P10809_1064
174.6
P10809_1086
127.6
P10809_1113
141.7
Memory CD8 T-cell nTPM: 168.5
Samples: 5
Max nTPM: 193.7
Min nTPM: 96.2
P10809_1012
96.2
P10809_1027
193.7
P10809_1046
182.0
P10809_1065
189.1
P10809_1111
181.5
Naive CD4 T-cell nTPM: 104.6
Samples: 6
Max nTPM: 158.0
Min nTPM: 49.8
P10809_1015
49.8
P10809_1030
135.5
P10809_1049
158.0
P10809_1068
97.3
P10809_1085
84.4
P10809_1112
102.7
Naive CD8 T-cell nTPM: 135.4
Samples: 6
Max nTPM: 162.8
Min nTPM: 84.4
P10809_1016
84.4
P10809_1031
141.4
P10809_1050
151.9
P10809_1069
160.6
P10809_1087
162.8
P10809_1110
111.4
T-reg nTPM: 204.2
Samples: 6
Max nTPM: 293.9
Min nTPM: 114.4
P10809_1018
114.4
P10809_1037
221.9
P10809_1056
293.9
P10809_1075
217.0
P10809_1094
186.0
P10809_1106
191.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
24.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 8.3
Samples: 4
Max nTPM: 13.5
Min nTPM: 0.0
RHH5202_R3573
9.9
RHH5230_R3602
9.7
RHH5259_R3631
13.5
RHH5288_R3660
0.0
Effector memory CD8 T-cell nTPM: 16.3
Samples: 4
Max nTPM: 26.2
Min nTPM: 9.8
RHH5203_R3574
10.7
RHH5231_R3603
9.8
RHH5260_R3632
18.6
RHH5289_R3661
26.2
MAIT T-cell nTPM: 6.3
Samples: 4
Max nTPM: 10.8
Min nTPM: 2.2
RHH5233_R3605
3.2
RHH5205_R3576
2.2
RHH5262_R3634
8.8
RHH5297_R3663
10.8
Memory CD4 T-cell TFH nTPM: 9.0
Samples: 4
Max nTPM: 11.9
Min nTPM: 6.0
RHH5300_R3666
6.0
RHH5236_R3608
9.4
RHH5265_R3637
8.6
RHH5208_R3579
11.9
Memory CD4 T-cell Th1 nTPM: 18.9
Samples: 4
Max nTPM: 39.7
Min nTPM: 8.1
RHH5210_R3581
8.1
RHH5302_R3668
11.5
RHH5238_R3610
39.7
RHH5267_R3639
16.1
Memory CD4 T-cell Th1/Th17 nTPM: 12.3
Samples: 4
Max nTPM: 18.5
Min nTPM: 3.0
RHH5303_R3669
11.7
RHH5211_R3582
3.0
RHH5239_R3611
18.5
RHH5268_R3640
15.9
Memory CD4 T-cell Th17 nTPM: 10.1
Samples: 4
Max nTPM: 13.6
Min nTPM: 5.3
RHH5304_R3670
12.0
RHH5212_R3583
5.3
RHH5240_R3612
9.5
RHH5269_R3641
13.6
Memory CD4 T-cell Th2 nTPM: 6.4
Samples: 4
Max nTPM: 8.6
Min nTPM: 3.3
RHH5305_R3671
8.6
RHH5213_R3584
7.1
RHH5241_R3613
6.5
RHH5270_R3642
3.3
Naive CD4 T-cell nTPM: 10.1
Samples: 4
Max nTPM: 19.6
Min nTPM: 5.6
RHH5306_R3672
6.2
RHH5214_R3585
19.6
RHH5242_R3614
5.6
RHH5271_R3643
8.8
Naive CD8 T-cell nTPM: 12.4
Samples: 4
Max nTPM: 18.4
Min nTPM: 6.1
RHH5201_R3572
6.1
RHH5229_R3601
17.1
RHH5258_R3630
8.0
RHH5287_R3659
18.4
Non-Vd2 gdTCR nTPM: 18.9
Samples: 4
Max nTPM: 26.3
Min nTPM: 12.9
RHH5235_R3607
21.5
RHH5264_R3636
26.3
RHH5207_R3578
14.9
RHH5299_R3665
12.9
T-reg nTPM: 9.2
Samples: 4
Max nTPM: 12.5
Min nTPM: 3.9
RHH5301_R3667
3.9
RHH5237_R3609
12.5
RHH5266_R3638
11.0
RHH5209_R3580
9.5
Terminal effector memory CD4 T-cell nTPM: 10.3
Samples: 2
Max nTPM: 12.2
Min nTPM: 8.4
RHH5243_R3615
12.2
RHH5272_R3644
8.4
Terminal effector memory CD8 T-cell nTPM: 21.1
Samples: 4
Max nTPM: 36.6
Min nTPM: 6.7
RHH5232_R3604
6.7
RHH5204_R3575
30.9
RHH5261_R3633
36.6
RHH5296_R3662
10.2
Vd2 gdTCR nTPM: 24.2
Samples: 4
Max nTPM: 51.1
Min nTPM: 8.4
RHH5234_R3606
11.2
RHH5206_R3577
51.1
RHH5263_R3635
26.2
RHH5298_R3664
8.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
