HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:21.4 nTPM
HPA Brain:12.5 nTPM
GTEx:21.4 nTPM
FANTOM5:25.9 Scaled Tags Per Million
Pig:64.6 nTPM
Mouse:17.6 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003438
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 12.5
Sample id Sample description nTPM
Hippocampus
nTPM: 11.3
1898 Male, age 80, left hemisphere 14.0
2529 Female, age 94, left hemisphere 12.1
1911 Female, age 85, right hemisphere 12.0
2621 Female, age 67, right hemisphere 10.7
1855 Male, age 76, left hemisphere 10.1
2148 Female, age 91, left hemisphere 9.0
Dentate gyrus
nTPM: 11.3
1927 Female, age 91, both hemispheres 13.7
2010 Male, age 76, both hemispheres 12.3
2528 Male, age 74, both hemispheres 11.4
2246 Female, age 85, both hemispheres 11.2
2530 Female, age 94, left hemisphere 10.4
2531 Female, age 67, both hemispheres 8.8
Entorhinal gyrus
nTPM: 10.6
2117 Female, age 91, right hemisphere 12.4
1938 Female, age 85, left hemisphere 11.4
2764 Male, age 80, right hemisphere 11.0
1787 Male, age 76, left hemisphere 10.8
2613 Female, age 94, left hemisphere 9.0
2686 Male, age 75, right hemisphere 8.9
Hippocampus, CA1
nTPM: 12.4
2082 Female, age 91, right hemisphere 14.2
2749 Male, age 80, left hemisphere 13.9
1873 Female, age 85, both hemispheres 12.5
2527 Male, age 74, both hemispheres 11.8
2045 Male, age 76, both hemispheres 9.4
Hippocampus, CA2
nTPM: 12.5
2249 Male, age 74, both hemispheres 18.0
1963 Male, age 80, left hemisphere 13.4
1940 Female, age 85, left hemisphere 12.0
2113 Female, age 91, right hemisphere 11.8
1892 Male, age 76, both hemispheres 10.8
2437 Female, age 94, left hemisphere 9.0
Hippocampus, CA3
nTPM: 12.4
2436 Male, age 74, both hemispheres 18.3
2137 Male, age 80, left hemisphere 14.1
1867 Male, age 76, both hemispheres 12.5
1891 Female, age 85, both hemispheres 11.5
2620 Female, age 94, left hemisphere 10.7
2861 Female, age 67, both hemispheres 7.4
Parahippocampal cortex
nTPM: 10.5
2250 Female, age 67, right hemisphere 12.2
1850 Male, age 80, both hemispheres 11.3
1990 Female, age 91, right hemisphere 11.3
1933 Female, age 85, both hemispheres 10.8
2245 Female, age 91, both hemispheres 10.6
2018 Male, age 76, both hemispheres 10.2
2532 Female, age 72, left hemisphere 10.1
2692 Male, age 74, both hemispheres 9.9
2693 Female, age 94, both hemispheres 9.9
2622 Female, age 67, right hemisphere 8.7
Perirhinal gyrus
nTPM: 10.4
2521 Female, age 94, right hemisphere 11.4
1794 Male, age 80, right hemisphere 10.8
1847 Female, age 91, left hemisphere 10.4
1841 Female, age 85, right hemisphere 10.0
2848 Male, age 76, right hemisphere 9.5
Subiculum
nTPM: 11.2
1901 Male, age 80, both hemispheres 12.0
1977 Female, age 85, both hemispheres 11.8
2619 Male, age 74, both hemispheres 11.8
2729 Female, age 91, right hemisphere 11.2
2042 Male, age 76, both hemispheres 11.1
2438 Female, age 94, left hemisphere 9.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 21.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.4
Samples: 197

Max nTPM: 49.4
Min nTPM: 9.8
Std nTPM: 5.4
Median nTPM: 20.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 49.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 41.9
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 36.9
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 36.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 34.4
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 34.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 33.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 33.3
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 33.1
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 32.1
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 32.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 25.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 25.9
FF:10169-103B7 60 years, female 25.9
FF:10153-102I9 76 years, female 25.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 64.6
Pig sample Sample description nTPM
Subiculum
nTPM: 41.7
Samples: 4

Max nTPM: 120.7
Min nTPM: 12.9
Sample A Female 120.7
Sample B Female 12.9
Sample C Male 18.2
Sample D Male 15.0
Dorsal hippocampus
nTPM: 64.6
Samples: 4

Max nTPM: 194.6
Min nTPM: 19.4
Sample A Female 194.6
Sample B Female 19.4
Sample C Male 24.1
Sample D Male 20.2
Entorhinal cortex
nTPM: 41.2
Samples: 4

Max nTPM: 113.1
Min nTPM: 14.7
Sample A Female 113.1
Sample B Female 20.2
Sample C Male 14.7
Sample D Male 16.6
Ventral hippocampus
nTPM: 41.9
Samples: 4

Max nTPM: 103.6
Min nTPM: 16.9
Sample A Female 103.6
Sample B Female 16.9
Sample C Male 23.6
Sample D Male 23.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 17.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.6
Samples: 4

Max nTPM: 20.3
Min nTPM: 13.1
Sample A Male 17.8
Sample B Male 19.3
Sample C Female 20.3
Sample D Female 13.1
Hippocampal formation
nTPM: 17.6
Samples: 4

Max nTPM: 19.6
Min nTPM: 13.4
Sample A Male 19.6
Sample B Male 13.4
Sample C Female 18.5
Sample D Female 18.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
68920773 Antisense, RP_050303_01_B11, Mouse strain C57BL/6J (56 days, male) 0.0

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