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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
188.3
nTPM
Monaco:
65.2
nTPM
Schmiedel:
32.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
188.3
HPA sample
nTPM
gdT-cell nTPM: 92.5
Samples: 6
Max nTPM: 132.4
Min nTPM: 61.4
P10809_1007
79.5
P10809_1022
132.4
P10809_1041
103.1
P10809_1060
61.4
P10809_1077
94.0
P10809_1098
84.4
MAIT T-cell nTPM: 88.1
Samples: 6
Max nTPM: 140.2
Min nTPM: 59.5
P10809_1006
75.0
P10809_1024
140.2
P10809_1043
85.2
P10809_1062
59.5
P10809_1083
95.7
P10809_1097
73.0
Memory CD4 T-cell nTPM: 126.9
Samples: 6
Max nTPM: 172.2
Min nTPM: 104.5
P10809_1014
127.8
P10809_1026
172.2
P10809_1045
124.2
P10809_1064
104.5
P10809_1086
119.7
P10809_1113
113.2
Memory CD8 T-cell nTPM: 92.4
Samples: 5
Max nTPM: 129.6
Min nTPM: 73.0
P10809_1012
73.0
P10809_1027
129.6
P10809_1046
99.6
P10809_1065
84.7
P10809_1111
75.1
Naive CD4 T-cell nTPM: 121.3
Samples: 6
Max nTPM: 155.9
Min nTPM: 92.3
P10809_1015
113.4
P10809_1030
155.9
P10809_1049
134.2
P10809_1068
92.3
P10809_1085
132.0
P10809_1112
100.1
Naive CD8 T-cell nTPM: 100.9
Samples: 6
Max nTPM: 155.9
Min nTPM: 80.8
P10809_1016
90.7
P10809_1031
155.9
P10809_1050
93.3
P10809_1069
83.8
P10809_1087
100.9
P10809_1110
80.8
T-reg nTPM: 188.4
Samples: 6
Max nTPM: 257.8
Min nTPM: 133.3
P10809_1018
133.3
P10809_1037
257.8
P10809_1056
209.8
P10809_1075
167.7
P10809_1094
208.9
P10809_1106
152.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
65.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 42.1
Samples: 4
Max nTPM: 51.9
Min nTPM: 34.0
RHH5202_R3573
43.4
RHH5230_R3602
39.2
RHH5259_R3631
34.0
RHH5288_R3660
51.9
Effector memory CD8 T-cell nTPM: 26.3
Samples: 4
Max nTPM: 34.0
Min nTPM: 15.9
RHH5203_R3574
15.9
RHH5231_R3603
34.0
RHH5260_R3632
31.5
RHH5289_R3661
23.8
MAIT T-cell nTPM: 37.5
Samples: 4
Max nTPM: 53.1
Min nTPM: 24.9
RHH5233_R3605
39.1
RHH5205_R3576
24.9
RHH5262_R3634
33.0
RHH5297_R3663
53.1
Memory CD4 T-cell TFH nTPM: 65.2
Samples: 4
Max nTPM: 120.4
Min nTPM: 38.8
RHH5300_R3666
58.4
RHH5236_R3608
120.4
RHH5265_R3637
43.0
RHH5208_R3579
38.8
Memory CD4 T-cell Th1 nTPM: 59.6
Samples: 4
Max nTPM: 92.8
Min nTPM: 29.1
RHH5210_R3581
29.1
RHH5302_R3668
92.8
RHH5238_R3610
70.9
RHH5267_R3639
45.6
Memory CD4 T-cell Th1/Th17 nTPM: 54.3
Samples: 4
Max nTPM: 82.8
Min nTPM: 39.8
RHH5303_R3669
82.8
RHH5211_R3582
49.2
RHH5239_R3611
45.4
RHH5268_R3640
39.8
Memory CD4 T-cell Th17 nTPM: 40.8
Samples: 4
Max nTPM: 47.4
Min nTPM: 29.7
RHH5304_R3670
47.4
RHH5212_R3583
43.5
RHH5240_R3612
42.6
RHH5269_R3641
29.7
Memory CD4 T-cell Th2 nTPM: 55.0
Samples: 4
Max nTPM: 96.8
Min nTPM: 34.8
RHH5305_R3671
52.6
RHH5213_R3584
34.8
RHH5241_R3613
96.8
RHH5270_R3642
35.7
Naive CD4 T-cell nTPM: 52.1
Samples: 4
Max nTPM: 71.5
Min nTPM: 30.0
RHH5306_R3672
61.1
RHH5214_R3585
71.5
RHH5242_R3614
45.7
RHH5271_R3643
30.0
Naive CD8 T-cell nTPM: 32.7
Samples: 4
Max nTPM: 39.7
Min nTPM: 29.6
RHH5201_R3572
31.7
RHH5229_R3601
29.7
RHH5258_R3630
39.7
RHH5287_R3659
29.6
Non-Vd2 gdTCR nTPM: 41.1
Samples: 4
Max nTPM: 67.4
Min nTPM: 27.7
RHH5235_R3607
27.7
RHH5264_R3636
34.6
RHH5207_R3578
34.7
RHH5299_R3665
67.4
T-reg nTPM: 55.4
Samples: 4
Max nTPM: 73.7
Min nTPM: 38.8
RHH5301_R3667
66.6
RHH5237_R3609
73.7
RHH5266_R3638
42.3
RHH5209_R3580
38.8
Terminal effector memory CD4 T-cell nTPM: 42.9
Samples: 2
Max nTPM: 52.8
Min nTPM: 33.0
RHH5243_R3615
33.0
RHH5272_R3644
52.8
Terminal effector memory CD8 T-cell nTPM: 59.1
Samples: 4
Max nTPM: 108.5
Min nTPM: 38.1
RHH5232_R3604
38.1
RHH5204_R3575
108.5
RHH5261_R3633
38.3
RHH5296_R3662
51.6
Vd2 gdTCR nTPM: 42.6
Samples: 4
Max nTPM: 62.8
Min nTPM: 23.4
RHH5234_R3606
34.3
RHH5206_R3577
50.0
RHH5263_R3635
23.4
RHH5298_R3664
62.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
