HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:15.8 nTPM
HPA Brain:48.9 nTPM
GTEx:15.8 nTPM
FANTOM5:158.9 Scaled Tags Per Million
Pig:53.7 nTPM
Mouse:32.4 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003025
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 48.9
Sample id Sample description nTPM
Hippocampus
nTPM: 47.3
2621 Female, age 67, right hemisphere 55.0
2148 Female, age 91, left hemisphere 50.5
1855 Male, age 76, left hemisphere 46.6
1911 Female, age 85, right hemisphere 44.8
2529 Female, age 94, left hemisphere 44.6
1898 Male, age 80, left hemisphere 42.5
Dentate gyrus
nTPM: 47.9
2531 Female, age 67, both hemispheres 58.1
2246 Female, age 85, both hemispheres 48.7
2010 Male, age 76, both hemispheres 48.4
1927 Female, age 91, both hemispheres 45.5
2530 Female, age 94, left hemisphere 43.6
2528 Male, age 74, both hemispheres 43.1
Entorhinal gyrus
nTPM: 48.5
2686 Male, age 75, right hemisphere 56.9
2613 Female, age 94, left hemisphere 48.1
1938 Female, age 85, left hemisphere 47.8
2764 Male, age 80, right hemisphere 46.5
1787 Male, age 76, left hemisphere 46.1
2117 Female, age 91, right hemisphere 45.9
Hippocampus, CA1
nTPM: 47.7
2045 Male, age 76, both hemispheres 55.5
1873 Female, age 85, both hemispheres 47.8
2082 Female, age 91, right hemisphere 47.4
2527 Male, age 74, both hemispheres 44.2
2749 Male, age 80, left hemisphere 43.8
Hippocampus, CA2
nTPM: 42.0
1892 Male, age 76, both hemispheres 46.3
2113 Female, age 91, right hemisphere 43.1
1940 Female, age 85, left hemisphere 42.2
2437 Female, age 94, left hemisphere 40.5
1963 Male, age 80, left hemisphere 40.0
2249 Male, age 74, both hemispheres 39.7
Hippocampus, CA3
nTPM: 48.3
2620 Female, age 94, left hemisphere 56.5
2861 Female, age 67, both hemispheres 48.9
1867 Male, age 76, both hemispheres 47.4
2137 Male, age 80, left hemisphere 47.1
1891 Female, age 85, both hemispheres 45.4
2436 Male, age 74, both hemispheres 44.3
Parahippocampal cortex
nTPM: 48.9
2622 Female, age 67, right hemisphere 55.8
2532 Female, age 72, left hemisphere 52.5
2245 Female, age 91, both hemispheres 51.4
2018 Male, age 76, both hemispheres 51.2
1850 Male, age 80, both hemispheres 49.8
1933 Female, age 85, both hemispheres 49.2
2693 Female, age 94, both hemispheres 47.4
2692 Male, age 74, both hemispheres 46.9
2250 Female, age 67, right hemisphere 42.6
1990 Female, age 91, right hemisphere 42.4
Perirhinal gyrus
nTPM: 46.8
1841 Female, age 85, right hemisphere 51.9
2848 Male, age 76, right hemisphere 49.4
2521 Female, age 94, right hemisphere 45.9
1794 Male, age 80, right hemisphere 43.3
1847 Female, age 91, left hemisphere 43.3
Subiculum
nTPM: 44.9
2042 Male, age 76, both hemispheres 50.4
1977 Female, age 85, both hemispheres 47.8
2619 Male, age 74, both hemispheres 47.3
1901 Male, age 80, both hemispheres 43.5
2729 Female, age 91, right hemisphere 41.4
2438 Female, age 94, left hemisphere 38.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.8
Samples: 197

Max nTPM: 38.2
Min nTPM: 5.8
Std nTPM: 4.7
Median nTPM: 15.3
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 38.2
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 29.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 28.9
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 26.4
GTEX-1E1VI-0011-R1a-SM-ARZMM 50-59 years, male 25.6
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 25.1
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 24.9
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 24.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 24.4
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 24.3
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 24.1
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 158.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 158.9
FF:10169-103B7 60 years, female 200.4
FF:10153-102I9 76 years, female 117.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 53.7
Pig sample Sample description nTPM
Subiculum
nTPM: 53.7
Samples: 4

Max nTPM: 56.5
Min nTPM: 50.9
Sample A Female 52.4
Sample B Female 50.9
Sample C Male 55.0
Sample D Male 56.5
Dorsal hippocampus
nTPM: 53.4
Samples: 4

Max nTPM: 57.2
Min nTPM: 50.6
Sample A Female 52.0
Sample B Female 50.6
Sample C Male 57.2
Sample D Male 53.6
Entorhinal cortex
nTPM: 52.1
Samples: 4

Max nTPM: 57.7
Min nTPM: 47.7
Sample A Female 52.3
Sample B Female 47.7
Sample C Male 50.5
Sample D Male 57.7
Ventral hippocampus
nTPM: 51.5
Samples: 4

Max nTPM: 55.2
Min nTPM: 45.2
Sample A Female 55.2
Sample B Female 51.4
Sample C Male 45.2
Sample D Male 54.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 32.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 30.6
Samples: 4

Max nTPM: 32.4
Min nTPM: 29.0
Sample A Male 29.0
Sample B Male 31.4
Sample C Female 29.7
Sample D Female 32.4
Hippocampal formation
nTPM: 32.4
Samples: 4

Max nTPM: 36.8
Min nTPM: 29.1
Sample A Male 30.8
Sample B Male 36.8
Sample C Female 32.7
Sample D Female 29.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org