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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
96.1
nTPM
Monaco:
458.3
nTPM
Schmiedel:
741.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
96.1
HPA sample
nTPM
gdT-cell nTPM: 53.4
Samples: 6
Max nTPM: 70.0
Min nTPM: 40.2
P10809_1007
45.2
P10809_1022
55.5
P10809_1041
40.2
P10809_1060
49.2
P10809_1077
60.5
P10809_1098
70.0
MAIT T-cell nTPM: 54.7
Samples: 6
Max nTPM: 69.3
Min nTPM: 38.8
P10809_1006
41.3
P10809_1024
60.8
P10809_1043
38.8
P10809_1062
54.6
P10809_1083
63.6
P10809_1097
69.3
Memory CD4 T-cell nTPM: 65.9
Samples: 6
Max nTPM: 78.6
Min nTPM: 54.4
P10809_1014
62.3
P10809_1026
54.4
P10809_1045
63.9
P10809_1064
65.9
P10809_1086
78.6
P10809_1113
70.5
Memory CD8 T-cell nTPM: 64.2
Samples: 5
Max nTPM: 79.7
Min nTPM: 48.3
P10809_1012
57.8
P10809_1027
57.9
P10809_1046
48.3
P10809_1065
77.2
P10809_1111
79.7
Naive CD4 T-cell nTPM: 62.3
Samples: 6
Max nTPM: 67.6
Min nTPM: 54.3
P10809_1015
63.4
P10809_1030
56.0
P10809_1049
54.3
P10809_1068
65.7
P10809_1085
67.6
P10809_1112
66.9
Naive CD8 T-cell nTPM: 55.9
Samples: 6
Max nTPM: 79.6
Min nTPM: 39.8
P10809_1016
45.0
P10809_1031
39.8
P10809_1050
49.2
P10809_1069
64.0
P10809_1087
79.6
P10809_1110
57.9
T-reg nTPM: 96.1
Samples: 6
Max nTPM: 110.4
Min nTPM: 77.5
P10809_1018
77.5
P10809_1037
90.5
P10809_1056
91.6
P10809_1075
110.4
P10809_1094
100.1
P10809_1106
106.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
458.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 458.3
Samples: 4
Max nTPM: 756.1
Min nTPM: 305.9
RHH5202_R3573
756.1
RHH5230_R3602
458.8
RHH5259_R3631
312.4
RHH5288_R3660
305.9
Effector memory CD8 T-cell nTPM: 398.3
Samples: 4
Max nTPM: 636.5
Min nTPM: 259.0
RHH5203_R3574
636.5
RHH5231_R3603
346.3
RHH5260_R3632
259.0
RHH5289_R3661
351.4
MAIT T-cell nTPM: 396.7
Samples: 4
Max nTPM: 700.5
Min nTPM: 253.7
RHH5233_R3605
362.6
RHH5205_R3576
700.5
RHH5262_R3634
269.8
RHH5297_R3663
253.7
Memory CD4 T-cell TFH nTPM: 435.6
Samples: 4
Max nTPM: 728.8
Min nTPM: 264.0
RHH5300_R3666
294.2
RHH5236_R3608
455.2
RHH5265_R3637
264.0
RHH5208_R3579
728.8
Memory CD4 T-cell Th1 nTPM: 356.1
Samples: 4
Max nTPM: 495.3
Min nTPM: 280.1
RHH5210_R3581
495.3
RHH5302_R3668
293.6
RHH5238_R3610
355.3
RHH5267_R3639
280.1
Memory CD4 T-cell Th1/Th17 nTPM: 358.7
Samples: 4
Max nTPM: 519.9
Min nTPM: 241.3
RHH5303_R3669
303.8
RHH5211_R3582
519.9
RHH5239_R3611
369.7
RHH5268_R3640
241.3
Memory CD4 T-cell Th17 nTPM: 355.6
Samples: 4
Max nTPM: 462.0
Min nTPM: 246.4
RHH5304_R3670
317.1
RHH5212_R3583
462.0
RHH5240_R3612
396.9
RHH5269_R3641
246.4
Memory CD4 T-cell Th2 nTPM: 386.8
Samples: 4
Max nTPM: 515.9
Min nTPM: 263.5
RHH5305_R3671
297.3
RHH5213_R3584
515.9
RHH5241_R3613
470.6
RHH5270_R3642
263.5
Naive CD4 T-cell nTPM: 322.9
Samples: 4
Max nTPM: 446.8
Min nTPM: 226.5
RHH5306_R3672
226.5
RHH5214_R3585
446.8
RHH5242_R3614
389.0
RHH5271_R3643
229.4
Naive CD8 T-cell nTPM: 410.0
Samples: 4
Max nTPM: 675.3
Min nTPM: 289.8
RHH5201_R3572
675.3
RHH5229_R3601
373.0
RHH5258_R3630
289.8
RHH5287_R3659
301.7
Non-Vd2 gdTCR nTPM: 330.2
Samples: 4
Max nTPM: 480.6
Min nTPM: 240.5
RHH5235_R3607
305.2
RHH5264_R3636
294.4
RHH5207_R3578
480.6
RHH5299_R3665
240.5
T-reg nTPM: 340.7
Samples: 4
Max nTPM: 432.5
Min nTPM: 260.5
RHH5301_R3667
277.7
RHH5237_R3609
391.9
RHH5266_R3638
260.5
RHH5209_R3580
432.5
Terminal effector memory CD4 T-cell nTPM: 251.8
Samples: 2
Max nTPM: 261.7
Min nTPM: 241.9
RHH5243_R3615
261.7
RHH5272_R3644
241.9
Terminal effector memory CD8 T-cell nTPM: 315.9
Samples: 4
Max nTPM: 423.9
Min nTPM: 262.9
RHH5232_R3604
309.6
RHH5204_R3575
423.9
RHH5261_R3633
267.0
RHH5296_R3662
262.9
Vd2 gdTCR nTPM: 379.5
Samples: 4
Max nTPM: 578.7
Min nTPM: 221.2
RHH5234_R3606
380.6
RHH5206_R3577
578.7
RHH5263_R3635
337.5
RHH5298_R3664
221.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.