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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
80.7
nTPM
GTEx:
80.7
nTPM
FANTOM5:
44.5
Scaled Tags Per Million
Pig:
9.9
nTPM
Mouse:
28.6
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
80.7
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 80.7
Samples: 105
Max nTPM: 257.2
Min nTPM: 15.5
Std nTPM: 44.2
Median nTPM:
137_1
83 years, male
257.2
162_1
79 years, female
201.7
491_1
89 years, female
182.9
308_1
70 years, female
182.0
501_1
88 years, male
175.4
18_1
88 years, male
164.6
307_1
66 years, female
152.0
120_1
70 years, female
150.9
314_1
67 years, male
149.7
518_1
75 years, female
145.8
145_1
84 years, male
138.4
315_1
62 years, female
134.5
243_1
75 years, male
132.6
117_1
61 years, male
132.2
17_1
71 years, male
131.3
4_1
88 years, female
130.4
384_1
83 years, male
125.1
386_1
76 years, male
125.0
452_1
88 years, female
122.0
173_1
67 years, male
117.6
347_1
72 years, male
109.8
41_1
94 years, female
106.5
139_1
64 years, female
106.2
288_1
66 years, female
104.8
313_1
79 years, female
104.6
495_1
57 years, female
103.6
149_1
88 years, male
102.8
109_1
81 years, female
101.9
379_1
60 years, male
101.4
376_1
75 years, female
99.9
264_1
73 years, female
97.7
353_1
82 years, female
97.0
349_1
83 years, male
96.3
295_1
61 years, female
94.8
389_1
86 years, female
94.2
351_1
91 years, male
93.8
322_1
76 years, male
88.6
218_1
71 years, female
86.0
43_1
64 years, female
85.6
251_1
78 years, male
83.0
447_1
81 years, male
82.1
35_1
74 years, female
80.7
490_1
67 years, female
79.5
142_1
61 years, female
78.9
42_1
85 years, male
78.7
189_1
76 years, male
78.3
6_1
73 years, female
78.0
89_1
63 years, male
77.4
415_1
77 years, female
77.3
254_1
77 years, female
76.4
319_1
81 years, male
74.0
318_1
68 years, male
73.0
348_1
84 years, male
73.0
291_1
76 years, male
72.5
119_1
70 years, female
71.5
115_1
83 years, male
71.4
517_1
88 years, male
70.5
317_1
60 years, male
70.4
265_1
87 years, male
70.2
311_1
78 years, male
70.1
324_1
76 years, male
69.9
396_1
62 years, male
69.1
506_1
65 years, male
68.0
350_1
84 years, female
66.8
414_1
84 years, female
65.5
320_1
89 years, female
62.7
375_1
74 years, female
61.2
99_1
64 years, male
58.8
237_1
82 years, male
58.1
354_1
81 years, female
56.5
32_1
67 years, male
53.8
217_1
76 years, male
53.1
335_1
73 years, female
52.6
394_1
75 years, female
50.0
526_1
61 years, male
49.5
466_1
57 years, female
49.0
503_1
68 years, male
48.3
405_1
91 years, male
47.5
2_1
77 years, female
47.0
286_1
68 years, female
45.2
316_1
62 years, male
45.1
246_1
77 years, male
45.0
292_1
71 years, male
44.5
355_1
70 years, female
43.9
81_1
67 years, male
43.8
499_1
55 years, female
43.5
9_1
66 years, female
42.8
229_1
69 years, female
41.5
177_1
74 years, male
40.5
404_1
82 years, female
38.1
153_1
70 years, female
37.0
406_1
79 years, male
35.4
425_1
59 years, female
33.8
480_1
63 years, male
28.6
126_1
63 years, male
28.1
468_1
89 years, male
27.7
413_1
59 years, female
27.6
266_1
85 years, male
26.5
293_1
68 years, female
26.0
172_1
72 years, female
24.2
356_1
87 years, female
22.7
377_1
82 years, female
22.1
163_1
78 years, male
20.9
321_1
62 years, female
18.4
352_1
62 years, male
15.5
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
