HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:91.5 nTPM
HPA Brain:133.8 nTPM
GTEx:91.5 nTPM
FANTOM5:102.9 Scaled Tags Per Million
Pig:87.3 nTPM
Mouse:142.7 nTPM
Allen mouse:10.8 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 133.8
Sample id Sample description nTPM
Hippocampus
nTPM: 109.5
2148 Female, age 91, left hemisphere 140.7
2621 Female, age 67, right hemisphere 140.6
1898 Male, age 80, left hemisphere 132.9
1855 Male, age 76, left hemisphere 107.8
1911 Female, age 85, right hemisphere 71.7
2529 Female, age 94, left hemisphere 63.3
Dentate gyrus
nTPM: 131.2
2531 Female, age 67, both hemispheres 188.4
1927 Female, age 91, both hemispheres 158.9
2246 Female, age 85, both hemispheres 116.3
2010 Male, age 76, both hemispheres 111.5
2528 Male, age 74, both hemispheres 111.3
2530 Female, age 94, left hemisphere 100.8
Entorhinal gyrus
nTPM: 38.6
2686 Male, age 75, right hemisphere 44.7
2764 Male, age 80, right hemisphere 43.1
1787 Male, age 76, left hemisphere 40.0
2117 Female, age 91, right hemisphere 35.9
2613 Female, age 94, left hemisphere 34.2
1938 Female, age 85, left hemisphere 33.8
Hippocampus, CA1
nTPM: 117.9
1873 Female, age 85, both hemispheres 135.4
2749 Male, age 80, left hemisphere 130.6
2045 Male, age 76, both hemispheres 125.5
2527 Male, age 74, both hemispheres 104.5
2082 Female, age 91, right hemisphere 93.5
Hippocampus, CA2
nTPM: 87.0
1963 Male, age 80, left hemisphere 163.8
1892 Male, age 76, both hemispheres 98.4
2113 Female, age 91, right hemisphere 83.5
2249 Male, age 74, both hemispheres 69.4
2437 Female, age 94, left hemisphere 54.2
1940 Female, age 85, left hemisphere 52.9
Hippocampus, CA3
nTPM: 133.8
2620 Female, age 94, left hemisphere 292.7
2861 Female, age 67, both hemispheres 178.4
2137 Male, age 80, left hemisphere 108.7
2436 Male, age 74, both hemispheres 78.9
1867 Male, age 76, both hemispheres 72.5
1891 Female, age 85, both hemispheres 71.8
Parahippocampal cortex
nTPM: 56.8
2693 Female, age 94, both hemispheres 86.6
2245 Female, age 91, both hemispheres 80.4
2250 Female, age 67, right hemisphere 68.0
2622 Female, age 67, right hemisphere 63.7
1850 Male, age 80, both hemispheres 56.2
2018 Male, age 76, both hemispheres 53.2
1933 Female, age 85, both hemispheres 45.0
2532 Female, age 72, left hemisphere 39.5
2692 Male, age 74, both hemispheres 38.8
1990 Female, age 91, right hemisphere 36.4
Perirhinal gyrus
nTPM: 68.0
2521 Female, age 94, right hemisphere 95.3
1794 Male, age 80, right hemisphere 78.1
1841 Female, age 85, right hemisphere 61.9
1847 Female, age 91, left hemisphere 55.5
2848 Male, age 76, right hemisphere 49.3
Subiculum
nTPM: 50.8
2729 Female, age 91, right hemisphere 99.3
1901 Male, age 80, both hemispheres 53.7
1977 Female, age 85, both hemispheres 42.8
2042 Male, age 76, both hemispheres 42.2
2619 Male, age 74, both hemispheres 40.8
2438 Female, age 94, left hemisphere 25.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 91.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 91.5
Samples: 197

Max nTPM: 407.0
Min nTPM: 7.4
Std nTPM: 68.1
Median nTPM: 70.1
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 407.0
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 297.0
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 297.0
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 254.3
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 249.8
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 246.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 246.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 235.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 232.7
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 232.7
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 218.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 102.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 102.9
FF:10169-103B7 60 years, female 143.3
FF:10153-102I9 76 years, female 62.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 87.3
Pig sample Sample description nTPM
Subiculum
nTPM: 32.6
Samples: 4

Max nTPM: 37.0
Min nTPM: 29.5
Sample A Female 37.0
Sample B Female 31.0
Sample C Male 32.9
Sample D Male 29.5
Dorsal hippocampus
nTPM: 73.8
Samples: 4

Max nTPM: 89.7
Min nTPM: 31.0
Sample A Female 89.7
Sample B Female 87.5
Sample C Male 31.0
Sample D Male 87.1
Entorhinal cortex
nTPM: 42.9
Samples: 4

Max nTPM: 51.1
Min nTPM: 35.4
Sample A Female 47.4
Sample B Female 51.1
Sample C Male 37.8
Sample D Male 35.4
Ventral hippocampus
nTPM: 87.4
Samples: 4

Max nTPM: 128.8
Min nTPM: 47.9
Sample A Female 128.8
Sample B Female 57.0
Sample C Male 115.7
Sample D Male 47.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 142.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 73.5
Samples: 4

Max nTPM: 84.1
Min nTPM: 64.9
Sample A Male 76.9
Sample B Male 68.1
Sample C Female 84.1
Sample D Female 64.9
Hippocampal formation
nTPM: 142.7
Samples: 4

Max nTPM: 162.1
Min nTPM: 129.3
Sample A Male 130.2
Sample B Male 149.0
Sample C Female 162.1
Sample D Female 129.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.8
81659533 Antisense, RP_090514_05_F08, Mouse strain C57BL/6J (56 days, male) 10.8

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