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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
213.0
nTPM
Monaco:
6857.4
nTPM
Schmiedel:
2003.1
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
213.0
HPA sample
nTPM
gdT-cell nTPM: 85.2
Samples: 6
Max nTPM: 129.8
Min nTPM: 35.8
P10809_1007
35.8
P10809_1022
129.8
P10809_1041
124.1
P10809_1060
108.3
P10809_1077
49.0
P10809_1098
64.3
MAIT T-cell nTPM: 212.9
Samples: 6
Max nTPM: 361.0
Min nTPM: 107.0
P10809_1006
140.6
P10809_1024
245.3
P10809_1043
361.0
P10809_1062
268.7
P10809_1083
107.0
P10809_1097
155.0
Memory CD4 T-cell nTPM: 75.8
Samples: 6
Max nTPM: 100.0
Min nTPM: 56.4
P10809_1014
56.4
P10809_1026
78.3
P10809_1045
100.0
P10809_1064
88.9
P10809_1086
59.2
P10809_1113
71.8
Memory CD8 T-cell nTPM: 88.5
Samples: 5
Max nTPM: 138.7
Min nTPM: 56.1
P10809_1012
64.4
P10809_1027
78.5
P10809_1046
138.7
P10809_1065
105.0
P10809_1111
56.1
Naive CD4 T-cell nTPM: 36.0
Samples: 6
Max nTPM: 55.5
Min nTPM: 19.0
P10809_1015
19.0
P10809_1030
45.0
P10809_1049
55.5
P10809_1068
35.9
P10809_1085
29.4
P10809_1112
31.4
Naive CD8 T-cell nTPM: 40.9
Samples: 6
Max nTPM: 54.8
Min nTPM: 20.7
P10809_1016
20.7
P10809_1031
52.8
P10809_1050
48.3
P10809_1069
54.8
P10809_1087
34.0
P10809_1110
34.6
T-reg nTPM: 68.2
Samples: 6
Max nTPM: 100.8
Min nTPM: 44.3
P10809_1018
44.3
P10809_1037
60.0
P10809_1056
100.8
P10809_1075
71.9
P10809_1094
77.1
P10809_1106
55.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
6857.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 1965.3
Samples: 4
Max nTPM: 4321.9
Min nTPM: 125.9
RHH5202_R3573
133.0
RHH5230_R3602
4321.9
RHH5259_R3631
3280.2
RHH5288_R3660
125.9
Effector memory CD8 T-cell nTPM: 1760.7
Samples: 4
Max nTPM: 3316.4
Min nTPM: 120.5
RHH5203_R3574
503.9
RHH5231_R3603
3101.9
RHH5260_R3632
3316.4
RHH5289_R3661
120.5
MAIT T-cell nTPM: 6857.5
Samples: 4
Max nTPM: 14551.6
Min nTPM: 240.5
RHH5233_R3605
240.5
RHH5205_R3576
14551.6
RHH5262_R3634
7103.7
RHH5297_R3663
5534.0
Memory CD4 T-cell TFH nTPM: 2068.6
Samples: 4
Max nTPM: 4504.6
Min nTPM: 125.7
RHH5300_R3666
3452.9
RHH5236_R3608
4504.6
RHH5265_R3637
191.1
RHH5208_R3579
125.7
Memory CD4 T-cell Th1 nTPM: 1705.8
Samples: 4
Max nTPM: 2738.1
Min nTPM: 455.3
RHH5210_R3581
455.3
RHH5302_R3668
1016.4
RHH5238_R3610
2738.1
RHH5267_R3639
2613.5
Memory CD4 T-cell Th1/Th17 nTPM: 3667.4
Samples: 4
Max nTPM: 8139.5
Min nTPM: 164.4
RHH5303_R3669
164.4
RHH5211_R3582
8139.5
RHH5239_R3611
2926.5
RHH5268_R3640
3439.3
Memory CD4 T-cell Th17 nTPM: 2536.4
Samples: 4
Max nTPM: 6503.5
Min nTPM: 75.8
RHH5304_R3670
244.1
RHH5212_R3583
6503.5
RHH5240_R3612
75.8
RHH5269_R3641
3322.0
Memory CD4 T-cell Th2 nTPM: 3033.8
Samples: 4
Max nTPM: 5573.8
Min nTPM: 123.7
RHH5305_R3671
3309.0
RHH5213_R3584
5573.8
RHH5241_R3613
123.7
RHH5270_R3642
3128.5
Naive CD4 T-cell nTPM: 1352.4
Samples: 4
Max nTPM: 2387.6
Min nTPM: 457.8
RHH5306_R3672
1495.0
RHH5214_R3585
2387.6
RHH5242_R3614
457.8
RHH5271_R3643
1069.1
Naive CD8 T-cell nTPM: 1274.5
Samples: 4
Max nTPM: 1827.9
Min nTPM: 81.6
RHH5201_R3572
81.6
RHH5229_R3601
1523.2
RHH5258_R3630
1827.9
RHH5287_R3659
1665.1
Non-Vd2 gdTCR nTPM: 1702.9
Samples: 4
Max nTPM: 3884.5
Min nTPM: 104.8
RHH5235_R3607
3884.5
RHH5264_R3636
104.8
RHH5207_R3578
135.0
RHH5299_R3665
2687.1
T-reg nTPM: 3257.9
Samples: 4
Max nTPM: 4061.8
Min nTPM: 2509.8
RHH5301_R3667
2697.6
RHH5237_R3609
4061.8
RHH5266_R3638
2509.8
RHH5209_R3580
3762.2
Terminal effector memory CD4 T-cell nTPM: 1011.9
Samples: 2
Max nTPM: 1965.8
Min nTPM: 57.9
RHH5243_R3615
1965.8
RHH5272_R3644
57.9
Terminal effector memory CD8 T-cell nTPM: 1417.0
Samples: 4
Max nTPM: 2935.4
Min nTPM: 66.0
RHH5232_R3604
66.0
RHH5204_R3575
2935.4
RHH5261_R3633
2553.1
RHH5296_R3662
113.4
Vd2 gdTCR nTPM: 3603.8
Samples: 4
Max nTPM: 4704.5
Min nTPM: 2445.6
RHH5234_R3606
4704.5
RHH5206_R3577
2445.6
RHH5263_R3635
2894.3
RHH5298_R3664
4370.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.