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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
136.1
nTPM
Monaco:
217.9
nTPM
Schmiedel:
46.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
136.1
HPA sample
nTPM
gdT-cell nTPM: 98.5
Samples: 6
Max nTPM: 109.8
Min nTPM: 72.5
P10809_1007
72.5
P10809_1022
104.7
P10809_1041
100.1
P10809_1060
105.2
P10809_1077
109.8
P10809_1098
98.8
MAIT T-cell nTPM: 100.9
Samples: 6
Max nTPM: 125.8
Min nTPM: 81.7
P10809_1006
83.6
P10809_1024
125.8
P10809_1043
81.7
P10809_1062
103.9
P10809_1083
107.5
P10809_1097
102.9
Memory CD4 T-cell nTPM: 99.5
Samples: 6
Max nTPM: 112.0
Min nTPM: 88.0
P10809_1014
88.0
P10809_1026
89.7
P10809_1045
111.3
P10809_1064
106.2
P10809_1086
112.0
P10809_1113
89.8
Memory CD8 T-cell nTPM: 108.7
Samples: 5
Max nTPM: 130.5
Min nTPM: 91.0
P10809_1012
91.0
P10809_1027
116.0
P10809_1046
102.0
P10809_1065
130.5
P10809_1111
104.2
Naive CD4 T-cell nTPM: 92.3
Samples: 6
Max nTPM: 98.5
Min nTPM: 82.3
P10809_1015
82.7
P10809_1030
97.6
P10809_1049
98.5
P10809_1068
97.6
P10809_1085
94.8
P10809_1112
82.3
Naive CD8 T-cell nTPM: 104.0
Samples: 6
Max nTPM: 131.6
Min nTPM: 80.0
P10809_1016
80.0
P10809_1031
99.6
P10809_1050
91.5
P10809_1069
125.9
P10809_1087
131.6
P10809_1110
95.5
T-reg nTPM: 136.1
Samples: 6
Max nTPM: 161.8
Min nTPM: 111.6
P10809_1018
111.6
P10809_1037
123.6
P10809_1056
153.5
P10809_1075
161.8
P10809_1094
134.2
P10809_1106
131.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
217.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 145.8
Samples: 4
Max nTPM: 185.2
Min nTPM: 111.5
RHH5202_R3573
172.8
RHH5230_R3602
113.5
RHH5259_R3631
111.5
RHH5288_R3660
185.2
Effector memory CD8 T-cell nTPM: 212.5
Samples: 4
Max nTPM: 243.0
Min nTPM: 168.6
RHH5203_R3574
229.8
RHH5231_R3603
243.0
RHH5260_R3632
168.6
RHH5289_R3661
208.4
MAIT T-cell nTPM: 165.9
Samples: 4
Max nTPM: 204.4
Min nTPM: 131.0
RHH5233_R3605
204.4
RHH5205_R3576
174.0
RHH5262_R3634
131.0
RHH5297_R3663
154.3
Memory CD4 T-cell TFH nTPM: 162.5
Samples: 4
Max nTPM: 200.1
Min nTPM: 125.2
RHH5300_R3666
125.2
RHH5236_R3608
200.1
RHH5265_R3637
158.5
RHH5208_R3579
166.2
Memory CD4 T-cell Th1 nTPM: 130.9
Samples: 4
Max nTPM: 138.8
Min nTPM: 113.0
RHH5210_R3581
138.8
RHH5302_R3668
138.3
RHH5238_R3610
113.0
RHH5267_R3639
133.6
Memory CD4 T-cell Th1/Th17 nTPM: 159.3
Samples: 4
Max nTPM: 196.9
Min nTPM: 108.3
RHH5303_R3669
196.9
RHH5211_R3582
183.0
RHH5239_R3611
108.3
RHH5268_R3640
148.9
Memory CD4 T-cell Th17 nTPM: 165.6
Samples: 4
Max nTPM: 191.8
Min nTPM: 134.3
RHH5304_R3670
168.3
RHH5212_R3583
191.8
RHH5240_R3612
134.3
RHH5269_R3641
167.9
Memory CD4 T-cell Th2 nTPM: 177.2
Samples: 4
Max nTPM: 194.2
Min nTPM: 149.0
RHH5305_R3671
174.8
RHH5213_R3584
194.2
RHH5241_R3613
190.7
RHH5270_R3642
149.0
Naive CD4 T-cell nTPM: 137.6
Samples: 4
Max nTPM: 144.3
Min nTPM: 132.2
RHH5306_R3672
140.7
RHH5214_R3585
144.3
RHH5242_R3614
132.2
RHH5271_R3643
133.1
Naive CD8 T-cell nTPM: 161.4
Samples: 4
Max nTPM: 199.8
Min nTPM: 86.3
RHH5201_R3572
199.8
RHH5229_R3601
86.3
RHH5258_R3630
190.2
RHH5287_R3659
169.2
Non-Vd2 gdTCR nTPM: 198.2
Samples: 4
Max nTPM: 232.6
Min nTPM: 169.0
RHH5235_R3607
169.0
RHH5264_R3636
232.6
RHH5207_R3578
215.8
RHH5299_R3665
175.4
T-reg nTPM: 167.5
Samples: 4
Max nTPM: 206.9
Min nTPM: 147.1
RHH5301_R3667
147.1
RHH5237_R3609
206.9
RHH5266_R3638
155.0
RHH5209_R3580
161.1
Terminal effector memory CD4 T-cell nTPM: 188.0
Samples: 2
Max nTPM: 193.7
Min nTPM: 182.3
RHH5243_R3615
182.3
RHH5272_R3644
193.7
Terminal effector memory CD8 T-cell nTPM: 218.0
Samples: 4
Max nTPM: 232.3
Min nTPM: 188.9
RHH5232_R3604
221.9
RHH5204_R3575
228.7
RHH5261_R3633
188.9
RHH5296_R3662
232.3
Vd2 gdTCR nTPM: 161.6
Samples: 4
Max nTPM: 178.2
Min nTPM: 137.0
RHH5234_R3606
178.2
RHH5206_R3577
174.8
RHH5263_R3635
156.3
RHH5298_R3664
137.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
