HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:92.7 nTPM
HPA Brain:96.6 nTPM
GTEx:92.7 nTPM
FANTOM5:66.7 Scaled Tags Per Million
Pig:85.6 nTPM
Mouse:190.3 nTPM
Allen mouse:5.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA027337Antibody HPA031082Antibody CAB017460
Glial cells Not detectedNot detectedNot detected
Neuronal cells LowMediumHigh







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 96.6
Sample id Sample description nTPM
Hippocampus
nTPM: 80.1
1898 Male, age 80, left hemisphere 106.0
2529 Female, age 94, left hemisphere 85.7
1855 Male, age 76, left hemisphere 79.4
2621 Female, age 67, right hemisphere 73.4
1911 Female, age 85, right hemisphere 71.2
2148 Female, age 91, left hemisphere 64.8
Dentate gyrus
nTPM: 80.7
2010 Male, age 76, both hemispheres 116.8
1927 Female, age 91, both hemispheres 88.1
2530 Female, age 94, left hemisphere 77.8
2246 Female, age 85, both hemispheres 75.1
2528 Male, age 74, both hemispheres 67.5
2531 Female, age 67, both hemispheres 59.0
Entorhinal gyrus
nTPM: 79.1
1938 Female, age 85, left hemisphere 94.0
2764 Male, age 80, right hemisphere 90.9
2117 Female, age 91, right hemisphere 79.4
2686 Male, age 75, right hemisphere 77.7
1787 Male, age 76, left hemisphere 76.4
2613 Female, age 94, left hemisphere 56.2
Hippocampus, CA1
nTPM: 96.6
2749 Male, age 80, left hemisphere 127.8
2045 Male, age 76, both hemispheres 119.4
1873 Female, age 85, both hemispheres 93.5
2082 Female, age 91, right hemisphere 71.8
2527 Male, age 74, both hemispheres 70.6
Hippocampus, CA2
nTPM: 89.2
1892 Male, age 76, both hemispheres 127.0
1963 Male, age 80, left hemisphere 107.0
2249 Male, age 74, both hemispheres 86.5
1940 Female, age 85, left hemisphere 75.2
2437 Female, age 94, left hemisphere 72.2
2113 Female, age 91, right hemisphere 67.4
Hippocampus, CA3
nTPM: 83.7
1867 Male, age 76, both hemispheres 117.8
2137 Male, age 80, left hemisphere 103.7
1891 Female, age 85, both hemispheres 79.3
2436 Male, age 74, both hemispheres 79.3
2620 Female, age 94, left hemisphere 73.5
2861 Female, age 67, both hemispheres 48.3
Parahippocampal cortex
nTPM: 78.6
1850 Male, age 80, both hemispheres 107.2
2018 Male, age 76, both hemispheres 99.5
1990 Female, age 91, right hemisphere 84.7
1933 Female, age 85, both hemispheres 83.3
2532 Female, age 72, left hemisphere 77.2
2250 Female, age 67, right hemisphere 75.5
2245 Female, age 91, both hemispheres 74.4
2692 Male, age 74, both hemispheres 68.3
2693 Female, age 94, both hemispheres 61.4
2622 Female, age 67, right hemisphere 54.8
Perirhinal gyrus
nTPM: 90.5
1847 Female, age 91, left hemisphere 104.5
1841 Female, age 85, right hemisphere 101.9
1794 Male, age 80, right hemisphere 93.8
2848 Male, age 76, right hemisphere 83.7
2521 Female, age 94, right hemisphere 68.7
Subiculum
nTPM: 81.4
2042 Male, age 76, both hemispheres 101.9
1901 Male, age 80, both hemispheres 91.2
1977 Female, age 85, both hemispheres 86.9
2438 Female, age 94, left hemisphere 79.9
2619 Male, age 74, both hemispheres 64.5
2729 Female, age 91, right hemisphere 64.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 92.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 92.7
Samples: 197

Max nTPM: 290.0
Min nTPM: 56.0
Std nTPM: 29.2
Median nTPM: 87.2
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 290.0
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 256.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 197.8
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 179.3
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 174.2
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 173.1
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 170.4
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 155.9
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 144.9
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 133.1
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 132.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 66.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 66.7
FF:10169-103B7 60 years, female 72.7
FF:10153-102I9 76 years, female 60.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 85.6
Pig sample Sample description nTPM
Subiculum
nTPM: 67.7
Samples: 4

Max nTPM: 83.1
Min nTPM: 61.4
Sample A Female 83.1
Sample B Female 62.1
Sample C Male 64.2
Sample D Male 61.4
Dorsal hippocampus
nTPM: 85.6
Samples: 4

Max nTPM: 111.5
Min nTPM: 69.4
Sample A Female 111.5
Sample B Female 86.5
Sample C Male 74.9
Sample D Male 69.4
Entorhinal cortex
nTPM: 63.9
Samples: 4

Max nTPM: 74.8
Min nTPM: 52.5
Sample A Female 74.8
Sample B Female 69.8
Sample C Male 58.6
Sample D Male 52.5
Ventral hippocampus
nTPM: 75.2
Samples: 4

Max nTPM: 88.2
Min nTPM: 54.5
Sample A Female 88.2
Sample B Female 54.5
Sample C Male 76.1
Sample D Male 81.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 190.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 174.2
Samples: 4

Max nTPM: 184.6
Min nTPM: 160.5
Sample A Male 160.5
Sample B Male 169.9
Sample C Female 184.6
Sample D Female 181.9
Hippocampal formation
nTPM: 190.3
Samples: 4

Max nTPM: 209.4
Min nTPM: 181.6
Sample A Male 209.4
Sample B Male 185.4
Sample C Female 181.6
Sample D Female 184.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.7
68191552 Antisense, RP_041129_01_D07, Mouse strain C57BL/6J (56 days, male) 5.7

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