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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
110.2
nTPM
Monaco:
274.2
nTPM
Schmiedel:
347.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
110.2
HPA sample
nTPM
gdT-cell nTPM: 84.5
Samples: 6
Max nTPM: 106.6
Min nTPM: 70.0
P10809_1007
70.0
P10809_1022
106.6
P10809_1041
94.2
P10809_1060
82.3
P10809_1077
76.7
P10809_1098
77.0
MAIT T-cell nTPM: 110.2
Samples: 6
Max nTPM: 146.4
Min nTPM: 82.3
P10809_1006
82.3
P10809_1024
146.4
P10809_1043
106.3
P10809_1062
105.2
P10809_1083
109.3
P10809_1097
111.9
Memory CD4 T-cell nTPM: 92.9
Samples: 6
Max nTPM: 99.7
Min nTPM: 84.1
P10809_1014
94.9
P10809_1026
93.6
P10809_1045
97.6
P10809_1064
84.1
P10809_1086
99.7
P10809_1113
87.3
Memory CD8 T-cell nTPM: 91.7
Samples: 5
Max nTPM: 101.5
Min nTPM: 80.7
P10809_1012
91.9
P10809_1027
91.0
P10809_1046
80.7
P10809_1065
93.2
P10809_1111
101.5
Naive CD4 T-cell nTPM: 94.7
Samples: 6
Max nTPM: 109.1
Min nTPM: 80.8
P10809_1015
89.9
P10809_1030
107.7
P10809_1049
109.1
P10809_1068
83.4
P10809_1085
97.1
P10809_1112
80.8
Naive CD8 T-cell nTPM: 92.7
Samples: 6
Max nTPM: 103.9
Min nTPM: 85.9
P10809_1016
85.9
P10809_1031
103.9
P10809_1050
87.2
P10809_1069
87.6
P10809_1087
101.1
P10809_1110
90.4
T-reg nTPM: 105.3
Samples: 6
Max nTPM: 135.7
Min nTPM: 78.7
P10809_1018
85.0
P10809_1037
135.7
P10809_1056
78.7
P10809_1075
111.9
P10809_1094
100.5
P10809_1106
120.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
274.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 231.8
Samples: 4
Max nTPM: 282.6
Min nTPM: 193.9
RHH5202_R3573
222.8
RHH5230_R3602
228.0
RHH5259_R3631
282.6
RHH5288_R3660
193.9
Effector memory CD8 T-cell nTPM: 262.8
Samples: 4
Max nTPM: 277.9
Min nTPM: 247.7
RHH5203_R3574
267.0
RHH5231_R3603
258.7
RHH5260_R3632
277.9
RHH5289_R3661
247.7
MAIT T-cell nTPM: 248.0
Samples: 4
Max nTPM: 276.9
Min nTPM: 197.4
RHH5233_R3605
251.4
RHH5205_R3576
266.1
RHH5262_R3634
276.9
RHH5297_R3663
197.4
Memory CD4 T-cell TFH nTPM: 221.1
Samples: 4
Max nTPM: 259.8
Min nTPM: 177.5
RHH5300_R3666
177.5
RHH5236_R3608
259.8
RHH5265_R3637
240.2
RHH5208_R3579
206.8
Memory CD4 T-cell Th1 nTPM: 215.2
Samples: 4
Max nTPM: 250.3
Min nTPM: 185.5
RHH5210_R3581
232.7
RHH5302_R3668
185.5
RHH5238_R3610
192.3
RHH5267_R3639
250.3
Memory CD4 T-cell Th1/Th17 nTPM: 227.9
Samples: 4
Max nTPM: 248.3
Min nTPM: 197.9
RHH5303_R3669
197.9
RHH5211_R3582
248.3
RHH5239_R3611
232.6
RHH5268_R3640
232.9
Memory CD4 T-cell Th17 nTPM: 274.2
Samples: 4
Max nTPM: 297.2
Min nTPM: 252.0
RHH5304_R3670
253.9
RHH5212_R3583
252.0
RHH5240_R3612
293.7
RHH5269_R3641
297.2
Memory CD4 T-cell Th2 nTPM: 264.2
Samples: 4
Max nTPM: 313.6
Min nTPM: 218.6
RHH5305_R3671
218.6
RHH5213_R3584
251.8
RHH5241_R3613
313.6
RHH5270_R3642
272.6
Naive CD4 T-cell nTPM: 234.2
Samples: 4
Max nTPM: 283.5
Min nTPM: 204.6
RHH5306_R3672
238.8
RHH5214_R3585
204.6
RHH5242_R3614
209.8
RHH5271_R3643
283.5
Naive CD8 T-cell nTPM: 253.0
Samples: 4
Max nTPM: 286.0
Min nTPM: 194.0
RHH5201_R3572
194.0
RHH5229_R3601
277.1
RHH5258_R3630
254.7
RHH5287_R3659
286.0
Non-Vd2 gdTCR nTPM: 250.1
Samples: 4
Max nTPM: 275.8
Min nTPM: 190.2
RHH5235_R3607
273.0
RHH5264_R3636
275.8
RHH5207_R3578
261.3
RHH5299_R3665
190.2
T-reg nTPM: 219.0
Samples: 4
Max nTPM: 254.6
Min nTPM: 163.3
RHH5301_R3667
163.3
RHH5237_R3609
216.2
RHH5266_R3638
254.6
RHH5209_R3580
241.8
Terminal effector memory CD4 T-cell nTPM: 251.5
Samples: 2
Max nTPM: 289.4
Min nTPM: 213.6
RHH5243_R3615
289.4
RHH5272_R3644
213.6
Terminal effector memory CD8 T-cell nTPM: 223.8
Samples: 4
Max nTPM: 270.5
Min nTPM: 187.0
RHH5232_R3604
236.7
RHH5204_R3575
187.0
RHH5261_R3633
270.5
RHH5296_R3662
200.8
Vd2 gdTCR nTPM: 211.9
Samples: 4
Max nTPM: 252.2
Min nTPM: 156.2
RHH5234_R3606
221.9
RHH5206_R3577
217.2
RHH5263_R3635
252.2
RHH5298_R3664
156.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.