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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
68.3
nTPM
Monaco:
68.2
nTPM
Schmiedel:
116.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
68.3
HPA sample
nTPM
gdT-cell nTPM: 43.6
Samples: 6
Max nTPM: 52.6
Min nTPM: 26.8
P10809_1007
26.8
P10809_1022
39.9
P10809_1041
45.8
P10809_1060
49.1
P10809_1077
52.6
P10809_1098
47.5
MAIT T-cell nTPM: 44.8
Samples: 6
Max nTPM: 54.3
Min nTPM: 31.4
P10809_1006
31.4
P10809_1024
54.3
P10809_1043
41.2
P10809_1062
46.6
P10809_1083
49.3
P10809_1097
45.9
Memory CD4 T-cell nTPM: 55.0
Samples: 6
Max nTPM: 73.4
Min nTPM: 40.0
P10809_1014
40.0
P10809_1026
56.7
P10809_1045
49.7
P10809_1064
49.6
P10809_1086
73.4
P10809_1113
60.5
Memory CD8 T-cell nTPM: 51.0
Samples: 5
Max nTPM: 58.6
Min nTPM: 39.3
P10809_1012
46.2
P10809_1027
55.9
P10809_1046
39.3
P10809_1065
55.0
P10809_1111
58.6
Naive CD4 T-cell nTPM: 68.3
Samples: 6
Max nTPM: 78.7
Min nTPM: 46.0
P10809_1015
46.0
P10809_1030
76.1
P10809_1049
73.5
P10809_1068
74.0
P10809_1085
78.7
P10809_1112
61.7
Naive CD8 T-cell nTPM: 64.0
Samples: 6
Max nTPM: 79.0
Min nTPM: 43.8
P10809_1016
43.8
P10809_1031
79.0
P10809_1050
56.7
P10809_1069
73.0
P10809_1087
65.7
P10809_1110
65.6
T-reg nTPM: 55.2
Samples: 6
Max nTPM: 71.8
Min nTPM: 35.2
P10809_1018
35.2
P10809_1037
71.4
P10809_1056
51.8
P10809_1075
47.3
P10809_1094
71.8
P10809_1106
53.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
68.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 36.5
Samples: 4
Max nTPM: 42.4
Min nTPM: 32.7
RHH5202_R3573
38.2
RHH5230_R3602
32.7
RHH5259_R3631
32.7
RHH5288_R3660
42.4
Effector memory CD8 T-cell nTPM: 37.5
Samples: 4
Max nTPM: 50.9
Min nTPM: 27.6
RHH5203_R3574
36.9
RHH5231_R3603
50.9
RHH5260_R3632
27.6
RHH5289_R3661
34.6
MAIT T-cell nTPM: 33.1
Samples: 4
Max nTPM: 44.2
Min nTPM: 25.0
RHH5233_R3605
25.0
RHH5205_R3576
27.1
RHH5262_R3634
36.2
RHH5297_R3663
44.2
Memory CD4 T-cell TFH nTPM: 53.4
Samples: 4
Max nTPM: 82.3
Min nTPM: 39.6
RHH5300_R3666
45.6
RHH5236_R3608
82.3
RHH5265_R3637
39.6
RHH5208_R3579
46.2
Memory CD4 T-cell Th1 nTPM: 45.3
Samples: 4
Max nTPM: 64.0
Min nTPM: 29.9
RHH5210_R3581
46.7
RHH5302_R3668
64.0
RHH5238_R3610
29.9
RHH5267_R3639
40.7
Memory CD4 T-cell Th1/Th17 nTPM: 39.5
Samples: 4
Max nTPM: 55.5
Min nTPM: 15.8
RHH5303_R3669
53.7
RHH5211_R3582
55.5
RHH5239_R3611
15.8
RHH5268_R3640
32.8
Memory CD4 T-cell Th17 nTPM: 41.8
Samples: 4
Max nTPM: 60.8
Min nTPM: 27.4
RHH5304_R3670
44.7
RHH5212_R3583
60.8
RHH5240_R3612
34.3
RHH5269_R3641
27.4
Memory CD4 T-cell Th2 nTPM: 48.4
Samples: 4
Max nTPM: 70.2
Min nTPM: 36.9
RHH5305_R3671
40.3
RHH5213_R3584
36.9
RHH5241_R3613
70.2
RHH5270_R3642
46.0
Naive CD4 T-cell nTPM: 68.2
Samples: 4
Max nTPM: 96.5
Min nTPM: 52.7
RHH5306_R3672
62.3
RHH5214_R3585
96.5
RHH5242_R3614
61.3
RHH5271_R3643
52.7
Naive CD8 T-cell nTPM: 40.0
Samples: 4
Max nTPM: 49.5
Min nTPM: 21.4
RHH5201_R3572
47.2
RHH5229_R3601
21.4
RHH5258_R3630
49.5
RHH5287_R3659
41.8
Non-Vd2 gdTCR nTPM: 41.3
Samples: 4
Max nTPM: 53.6
Min nTPM: 25.8
RHH5235_R3607
25.8
RHH5264_R3636
53.6
RHH5207_R3578
41.2
RHH5299_R3665
44.4
T-reg nTPM: 59.6
Samples: 4
Max nTPM: 89.3
Min nTPM: 40.5
RHH5301_R3667
62.1
RHH5237_R3609
89.3
RHH5266_R3638
40.5
RHH5209_R3580
46.3
Terminal effector memory CD4 T-cell nTPM: 40.3
Samples: 2
Max nTPM: 50.9
Min nTPM: 29.6
RHH5243_R3615
29.6
RHH5272_R3644
50.9
Terminal effector memory CD8 T-cell nTPM: 43.2
Samples: 4
Max nTPM: 67.1
Min nTPM: 28.4
RHH5232_R3604
31.8
RHH5204_R3575
67.1
RHH5261_R3633
28.4
RHH5296_R3662
45.5
Vd2 gdTCR nTPM: 44.2
Samples: 4
Max nTPM: 59.7
Min nTPM: 23.7
RHH5234_R3606
42.7
RHH5206_R3577
50.6
RHH5263_R3635
23.7
RHH5298_R3664
59.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
