HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:38.3 nTPM
HPA Brain:14.4 nTPM
GTEx:38.3 nTPM
FANTOM5:42.1 Scaled Tags Per Million
Pig:34.7 nTPM
Mouse:30.8 nTPM
Allen mouse:1.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038339
Glial cells Low
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 14.4
Sample id Sample description nTPM
Hippocampus
nTPM: 13.4
1898 Male, age 80, left hemisphere 18.4
1855 Male, age 76, left hemisphere 18.3
2621 Female, age 67, right hemisphere 15.3
2529 Female, age 94, left hemisphere 11.3
1911 Female, age 85, right hemisphere 10.5
2148 Female, age 91, left hemisphere 6.8
Dentate gyrus
nTPM: 12.4
2010 Male, age 76, both hemispheres 19.6
2530 Female, age 94, left hemisphere 14.0
1927 Female, age 91, both hemispheres 12.6
2246 Female, age 85, both hemispheres 12.4
2528 Male, age 74, both hemispheres 10.6
2531 Female, age 67, both hemispheres 5.1
Entorhinal gyrus
nTPM: 7.5
1938 Female, age 85, left hemisphere 10.8
2613 Female, age 94, left hemisphere 9.9
1787 Male, age 76, left hemisphere 8.6
2764 Male, age 80, right hemisphere 8.1
2117 Female, age 91, right hemisphere 5.7
2686 Male, age 75, right hemisphere 1.7
Hippocampus, CA1
nTPM: 13.4
2749 Male, age 80, left hemisphere 18.7
2527 Male, age 74, both hemispheres 14.8
1873 Female, age 85, both hemispheres 13.5
2045 Male, age 76, both hemispheres 11.9
2082 Female, age 91, right hemisphere 8.3
Hippocampus, CA2
nTPM: 11.3
1892 Male, age 76, both hemispheres 19.5
1940 Female, age 85, left hemisphere 11.6
1963 Male, age 80, left hemisphere 10.3
2249 Male, age 74, both hemispheres 9.4
2437 Female, age 94, left hemisphere 8.4
2113 Female, age 91, right hemisphere 8.3
Hippocampus, CA3
nTPM: 11.5
1867 Male, age 76, both hemispheres 16.7
2436 Male, age 74, both hemispheres 13.4
2137 Male, age 80, left hemisphere 12.5
2620 Female, age 94, left hemisphere 10.0
1891 Female, age 85, both hemispheres 9.3
2861 Female, age 67, both hemispheres 7.3
Parahippocampal cortex
nTPM: 10.7
1850 Male, age 80, both hemispheres 15.3
2018 Male, age 76, both hemispheres 12.1
2250 Female, age 67, right hemisphere 11.9
1933 Female, age 85, both hemispheres 11.7
2532 Female, age 72, left hemisphere 11.0
1990 Female, age 91, right hemisphere 10.7
2245 Female, age 91, both hemispheres 10.2
2622 Female, age 67, right hemisphere 9.2
2692 Male, age 74, both hemispheres 8.0
2693 Female, age 94, both hemispheres 7.4
Perirhinal gyrus
nTPM: 14.4
1847 Female, age 91, left hemisphere 18.5
1794 Male, age 80, right hemisphere 14.7
1841 Female, age 85, right hemisphere 14.1
2521 Female, age 94, right hemisphere 13.7
2848 Male, age 76, right hemisphere 11.1
Subiculum
nTPM: 11.8
2438 Female, age 94, left hemisphere 14.8
1977 Female, age 85, both hemispheres 13.6
2042 Male, age 76, both hemispheres 12.3
2619 Male, age 74, both hemispheres 10.9
1901 Male, age 80, both hemispheres 9.5
2729 Female, age 91, right hemisphere 9.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 38.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 38.3
Samples: 197

Max nTPM: 69.6
Min nTPM: 21.0
Std nTPM: 9.0
Median nTPM: 37.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 69.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 66.6
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 63.3
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 62.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 62.1
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 58.3
GTEX-1HSKV-0011-R1b-SM-CMKH7 60-69 years, male 58.0
GTEX-1E1VI-0011-R1a-SM-ARZMM 50-59 years, male 56.9
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 56.6
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 56.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 56.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 42.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 42.1
FF:10169-103B7 60 years, female 44.6
FF:10153-102I9 76 years, female 39.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 34.7
Pig sample Sample description nTPM
Subiculum
nTPM: 30.9
Samples: 4

Max nTPM: 34.9
Min nTPM: 27.8
Sample A Female 30.0
Sample B Female 30.8
Sample C Male 27.8
Sample D Male 34.9
Dorsal hippocampus
nTPM: 34.7
Samples: 4

Max nTPM: 39.6
Min nTPM: 31.2
Sample A Female 39.6
Sample B Female 31.6
Sample C Male 36.3
Sample D Male 31.2
Entorhinal cortex
nTPM: 29.6
Samples: 4

Max nTPM: 30.9
Min nTPM: 27.7
Sample A Female 30.9
Sample B Female 30.8
Sample C Male 28.9
Sample D Male 27.7
Ventral hippocampus
nTPM: 31.3
Samples: 4

Max nTPM: 32.9
Min nTPM: 29.3
Sample A Female 32.9
Sample B Female 31.7
Sample C Male 29.3
Sample D Male 31.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 30.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 27.8
Samples: 4

Max nTPM: 30.4
Min nTPM: 26.2
Sample A Male 26.2
Sample B Male 30.4
Sample C Female 27.6
Sample D Female 27.0
Hippocampal formation
nTPM: 30.8
Samples: 4

Max nTPM: 37.5
Min nTPM: 25.9
Sample A Male 37.5
Sample B Male 27.3
Sample C Female 25.9
Sample D Female 32.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.6
68522344 Antisense, RP_050118_01_H04, Mouse strain C57BL/6J (56 days, male) 1.6

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