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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
34.0
nTPM
Monaco:
216.3
nTPM
Schmiedel:
146.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
34.0
HPA sample
nTPM
gdT-cell nTPM: 34.0
Samples: 6
Max nTPM: 40.9
Min nTPM: 26.6
P10809_1007
40.9
P10809_1022
38.8
P10809_1041
26.6
P10809_1060
32.7
P10809_1077
30.3
P10809_1098
34.7
MAIT T-cell nTPM: 22.2
Samples: 6
Max nTPM: 39.6
Min nTPM: 16.5
P10809_1006
39.6
P10809_1024
19.2
P10809_1043
21.2
P10809_1062
19.6
P10809_1083
17.3
P10809_1097
16.5
Memory CD4 T-cell nTPM: 17.1
Samples: 6
Max nTPM: 22.4
Min nTPM: 10.6
P10809_1014
22.4
P10809_1026
10.6
P10809_1045
18.4
P10809_1064
16.1
P10809_1086
18.0
P10809_1113
17.0
Memory CD8 T-cell nTPM: 24.3
Samples: 5
Max nTPM: 32.8
Min nTPM: 18.0
P10809_1012
32.8
P10809_1027
24.7
P10809_1046
25.9
P10809_1065
18.0
P10809_1111
20.2
Naive CD4 T-cell nTPM: 20.9
Samples: 6
Max nTPM: 27.0
Min nTPM: 10.2
P10809_1015
26.4
P10809_1030
17.1
P10809_1049
10.2
P10809_1068
21.4
P10809_1085
23.3
P10809_1112
27.0
Naive CD8 T-cell nTPM: 25.9
Samples: 6
Max nTPM: 39.7
Min nTPM: 16.5
P10809_1016
39.7
P10809_1031
27.3
P10809_1050
16.5
P10809_1069
29.1
P10809_1087
19.9
P10809_1110
23.1
T-reg nTPM: 18.3
Samples: 6
Max nTPM: 35.3
Min nTPM: 11.2
P10809_1018
35.3
P10809_1037
11.2
P10809_1056
11.3
P10809_1075
19.6
P10809_1094
20.8
P10809_1106
11.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
216.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 166.4
Samples: 4
Max nTPM: 187.1
Min nTPM: 146.7
RHH5202_R3573
170.7
RHH5230_R3602
160.9
RHH5259_R3631
187.1
RHH5288_R3660
146.7
Effector memory CD8 T-cell nTPM: 189.4
Samples: 4
Max nTPM: 222.3
Min nTPM: 166.2
RHH5203_R3574
222.3
RHH5231_R3603
166.2
RHH5260_R3632
174.6
RHH5289_R3661
194.4
MAIT T-cell nTPM: 182.1
Samples: 4
Max nTPM: 221.6
Min nTPM: 153.7
RHH5233_R3605
193.5
RHH5205_R3576
221.6
RHH5262_R3634
153.7
RHH5297_R3663
159.4
Memory CD4 T-cell TFH nTPM: 142.6
Samples: 4
Max nTPM: 185.0
Min nTPM: 87.0
RHH5300_R3666
131.2
RHH5236_R3608
87.0
RHH5265_R3637
167.3
RHH5208_R3579
185.0
Memory CD4 T-cell Th1 nTPM: 177.1
Samples: 4
Max nTPM: 220.8
Min nTPM: 133.7
RHH5210_R3581
196.3
RHH5302_R3668
157.7
RHH5238_R3610
220.8
RHH5267_R3639
133.7
Memory CD4 T-cell Th1/Th17 nTPM: 184.0
Samples: 4
Max nTPM: 247.9
Min nTPM: 136.8
RHH5303_R3669
163.9
RHH5211_R3582
187.2
RHH5239_R3611
247.9
RHH5268_R3640
136.8
Memory CD4 T-cell Th17 nTPM: 135.3
Samples: 4
Max nTPM: 154.2
Min nTPM: 117.9
RHH5304_R3670
154.2
RHH5212_R3583
139.5
RHH5240_R3612
129.4
RHH5269_R3641
117.9
Memory CD4 T-cell Th2 nTPM: 141.9
Samples: 4
Max nTPM: 152.3
Min nTPM: 134.5
RHH5305_R3671
144.7
RHH5213_R3584
152.3
RHH5241_R3613
134.5
RHH5270_R3642
136.1
Naive CD4 T-cell nTPM: 161.5
Samples: 4
Max nTPM: 194.7
Min nTPM: 146.2
RHH5306_R3672
146.2
RHH5214_R3585
149.5
RHH5242_R3614
194.7
RHH5271_R3643
155.5
Naive CD8 T-cell nTPM: 189.7
Samples: 4
Max nTPM: 244.9
Min nTPM: 142.3
RHH5201_R3572
190.4
RHH5229_R3601
244.9
RHH5258_R3630
142.3
RHH5287_R3659
181.2
Non-Vd2 gdTCR nTPM: 216.3
Samples: 4
Max nTPM: 242.0
Min nTPM: 190.4
RHH5235_R3607
222.9
RHH5264_R3636
190.4
RHH5207_R3578
242.0
RHH5299_R3665
210.0
T-reg nTPM: 131.6
Samples: 4
Max nTPM: 148.8
Min nTPM: 109.7
RHH5301_R3667
130.2
RHH5237_R3609
109.7
RHH5266_R3638
148.8
RHH5209_R3580
137.7
Terminal effector memory CD4 T-cell nTPM: 198.5
Samples: 2
Max nTPM: 204.2
Min nTPM: 192.7
RHH5243_R3615
192.7
RHH5272_R3644
204.2
Terminal effector memory CD8 T-cell nTPM: 208.9
Samples: 4
Max nTPM: 253.3
Min nTPM: 177.6
RHH5232_R3604
220.3
RHH5204_R3575
177.6
RHH5261_R3633
184.2
RHH5296_R3662
253.3
Vd2 gdTCR nTPM: 203.6
Samples: 4
Max nTPM: 218.9
Min nTPM: 174.8
RHH5234_R3606
201.9
RHH5206_R3577
218.8
RHH5263_R3635
218.9
RHH5298_R3664
174.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
