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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
23.6
nTPM
Monaco:
243.6
nTPM
Schmiedel:
194.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
23.6
HPA sample
nTPM
gdT-cell nTPM: 16.6
Samples: 6
Max nTPM: 45.0
Min nTPM: 6.5
P10809_1007
45.0
P10809_1022
10.5
P10809_1041
12.1
P10809_1060
6.5
P10809_1077
10.0
P10809_1098
15.6
MAIT T-cell nTPM: 12.7
Samples: 6
Max nTPM: 26.7
Min nTPM: 2.9
P10809_1006
20.3
P10809_1024
2.9
P10809_1043
12.2
P10809_1062
3.6
P10809_1083
10.6
P10809_1097
26.7
Memory CD4 T-cell nTPM: 19.0
Samples: 6
Max nTPM: 32.9
Min nTPM: 5.1
P10809_1014
32.9
P10809_1026
18.0
P10809_1045
28.5
P10809_1064
24.4
P10809_1086
5.3
P10809_1113
5.1
Memory CD8 T-cell nTPM: 23.6
Samples: 5
Max nTPM: 38.7
Min nTPM: 8.0
P10809_1012
33.6
P10809_1027
8.0
P10809_1046
38.7
P10809_1065
16.2
P10809_1111
21.6
Naive CD4 T-cell nTPM: 18.2
Samples: 6
Max nTPM: 37.0
Min nTPM: 6.6
P10809_1015
23.5
P10809_1030
11.0
P10809_1049
37.0
P10809_1068
10.1
P10809_1085
20.7
P10809_1112
6.6
Naive CD8 T-cell nTPM: 14.9
Samples: 6
Max nTPM: 21.7
Min nTPM: 6.7
P10809_1016
12.1
P10809_1031
21.7
P10809_1050
15.3
P10809_1069
17.6
P10809_1087
6.7
P10809_1110
16.1
T-reg nTPM: 17.3
Samples: 6
Max nTPM: 49.8
Min nTPM: 5.3
P10809_1018
7.9
P10809_1037
10.5
P10809_1056
49.8
P10809_1075
17.3
P10809_1094
5.3
P10809_1106
12.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
243.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 209.1
Samples: 4
Max nTPM: 353.6
Min nTPM: 123.3
RHH5202_R3573
123.3
RHH5230_R3602
353.6
RHH5259_R3631
232.0
RHH5288_R3660
127.5
Effector memory CD8 T-cell nTPM: 208.9
Samples: 4
Max nTPM: 292.0
Min nTPM: 134.8
RHH5203_R3574
134.8
RHH5231_R3603
273.2
RHH5260_R3632
292.0
RHH5289_R3661
135.5
MAIT T-cell nTPM: 128.6
Samples: 4
Max nTPM: 189.5
Min nTPM: 93.4
RHH5233_R3605
123.8
RHH5205_R3576
93.4
RHH5262_R3634
189.5
RHH5297_R3663
107.6
Memory CD4 T-cell TFH nTPM: 194.1
Samples: 4
Max nTPM: 318.7
Min nTPM: 78.0
RHH5300_R3666
221.1
RHH5236_R3608
318.7
RHH5265_R3637
158.4
RHH5208_R3579
78.0
Memory CD4 T-cell Th1 nTPM: 207.3
Samples: 4
Max nTPM: 320.0
Min nTPM: 104.9
RHH5210_R3581
104.9
RHH5302_R3668
150.7
RHH5238_R3610
253.6
RHH5267_R3639
320.0
Memory CD4 T-cell Th1/Th17 nTPM: 171.0
Samples: 4
Max nTPM: 256.1
Min nTPM: 94.7
RHH5303_R3669
94.7
RHH5211_R3582
189.3
RHH5239_R3611
143.8
RHH5268_R3640
256.1
Memory CD4 T-cell Th17 nTPM: 161.8
Samples: 4
Max nTPM: 247.8
Min nTPM: 78.4
RHH5304_R3670
107.3
RHH5212_R3583
213.6
RHH5240_R3612
78.4
RHH5269_R3641
247.8
Memory CD4 T-cell Th2 nTPM: 183.9
Samples: 4
Max nTPM: 281.5
Min nTPM: 134.8
RHH5305_R3671
134.8
RHH5213_R3584
182.2
RHH5241_R3613
137.1
RHH5270_R3642
281.5
Naive CD4 T-cell nTPM: 186.9
Samples: 4
Max nTPM: 304.7
Min nTPM: 95.3
RHH5306_R3672
211.3
RHH5214_R3585
304.7
RHH5242_R3614
95.3
RHH5271_R3643
136.3
Naive CD8 T-cell nTPM: 113.9
Samples: 4
Max nTPM: 172.8
Min nTPM: 55.4
RHH5201_R3572
55.4
RHH5229_R3601
172.8
RHH5258_R3630
110.0
RHH5287_R3659
117.3
Non-Vd2 gdTCR nTPM: 243.6
Samples: 4
Max nTPM: 352.9
Min nTPM: 143.2
RHH5235_R3607
316.8
RHH5264_R3636
143.2
RHH5207_R3578
161.3
RHH5299_R3665
352.9
T-reg nTPM: 175.9
Samples: 4
Max nTPM: 216.9
Min nTPM: 118.7
RHH5301_R3667
118.7
RHH5237_R3609
216.9
RHH5266_R3638
191.9
RHH5209_R3580
176.1
Terminal effector memory CD4 T-cell nTPM: 150.2
Samples: 2
Max nTPM: 210.0
Min nTPM: 90.3
RHH5243_R3615
210.0
RHH5272_R3644
90.3
Terminal effector memory CD8 T-cell nTPM: 220.0
Samples: 4
Max nTPM: 334.5
Min nTPM: 139.2
RHH5232_R3604
139.2
RHH5204_R3575
221.5
RHH5261_R3633
334.5
RHH5296_R3662
184.8
Vd2 gdTCR nTPM: 196.8
Samples: 4
Max nTPM: 236.5
Min nTPM: 170.8
RHH5234_R3606
173.7
RHH5206_R3577
170.8
RHH5263_R3635
206.0
RHH5298_R3664
236.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
