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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
107.0
nTPM
Monaco:
189.0
nTPM
Schmiedel:
123.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
107.0
HPA sample
nTPM
gdT-cell nTPM: 7.8
Samples: 6
Max nTPM: 12.1
Min nTPM: 0.0
P10809_1007
8.1
P10809_1022
12.1
P10809_1041
0.0
P10809_1060
6.2
P10809_1077
10.4
P10809_1098
10.0
MAIT T-cell nTPM: 11.4
Samples: 6
Max nTPM: 17.7
Min nTPM: 7.6
P10809_1006
10.5
P10809_1024
17.7
P10809_1043
13.2
P10809_1062
10.6
P10809_1083
7.6
P10809_1097
8.6
Memory CD4 T-cell nTPM: 35.1
Samples: 6
Max nTPM: 65.4
Min nTPM: 20.2
P10809_1014
30.0
P10809_1026
65.4
P10809_1045
34.2
P10809_1064
20.2
P10809_1086
21.2
P10809_1113
39.4
Memory CD8 T-cell nTPM: 12.7
Samples: 5
Max nTPM: 19.5
Min nTPM: 4.4
P10809_1012
15.2
P10809_1027
19.5
P10809_1046
11.9
P10809_1065
4.4
P10809_1111
12.4
Naive CD4 T-cell nTPM: 107.0
Samples: 6
Max nTPM: 147.9
Min nTPM: 70.0
P10809_1015
71.8
P10809_1030
147.9
P10809_1049
124.3
P10809_1068
111.4
P10809_1085
70.0
P10809_1112
116.8
Naive CD8 T-cell nTPM: 50.6
Samples: 6
Max nTPM: 94.8
Min nTPM: 9.9
P10809_1016
54.2
P10809_1031
94.8
P10809_1050
42.5
P10809_1069
46.6
P10809_1087
9.9
P10809_1110
55.6
T-reg nTPM: 29.7
Samples: 6
Max nTPM: 47.2
Min nTPM: 14.9
P10809_1018
14.9
P10809_1037
34.4
P10809_1056
47.2
P10809_1075
25.2
P10809_1094
24.7
P10809_1106
32.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
189.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 54.0
Samples: 4
Max nTPM: 83.0
Min nTPM: 42.2
RHH5202_R3573
42.2
RHH5230_R3602
83.0
RHH5259_R3631
43.3
RHH5288_R3660
47.4
Effector memory CD8 T-cell nTPM: 11.9
Samples: 4
Max nTPM: 28.7
Min nTPM: 5.9
RHH5203_R3574
5.9
RHH5231_R3603
28.7
RHH5260_R3632
6.6
RHH5289_R3661
6.5
MAIT T-cell nTPM: 15.9
Samples: 4
Max nTPM: 29.2
Min nTPM: 9.1
RHH5233_R3605
29.2
RHH5205_R3576
9.1
RHH5262_R3634
10.4
RHH5297_R3663
14.7
Memory CD4 T-cell TFH nTPM: 87.3
Samples: 4
Max nTPM: 127.9
Min nTPM: 64.2
RHH5300_R3666
74.6
RHH5236_R3608
127.9
RHH5265_R3637
64.2
RHH5208_R3579
82.5
Memory CD4 T-cell Th1 nTPM: 79.2
Samples: 4
Max nTPM: 107.4
Min nTPM: 63.9
RHH5210_R3581
107.4
RHH5302_R3668
77.3
RHH5238_R3610
63.9
RHH5267_R3639
68.3
Memory CD4 T-cell Th1/Th17 nTPM: 46.7
Samples: 4
Max nTPM: 49.3
Min nTPM: 41.8
RHH5303_R3669
49.3
RHH5211_R3582
46.7
RHH5239_R3611
49.0
RHH5268_R3640
41.8
Memory CD4 T-cell Th17 nTPM: 58.4
Samples: 4
Max nTPM: 89.1
Min nTPM: 39.6
RHH5304_R3670
60.2
RHH5212_R3583
44.7
RHH5240_R3612
89.1
RHH5269_R3641
39.6
Memory CD4 T-cell Th2 nTPM: 88.8
Samples: 4
Max nTPM: 109.4
Min nTPM: 69.9
RHH5305_R3671
92.2
RHH5213_R3584
83.5
RHH5241_R3613
109.4
RHH5270_R3642
69.9
Naive CD4 T-cell nTPM: 189.0
Samples: 4
Max nTPM: 226.6
Min nTPM: 155.7
RHH5306_R3672
155.7
RHH5214_R3585
174.6
RHH5242_R3614
226.6
RHH5271_R3643
199.0
Naive CD8 T-cell nTPM: 136.9
Samples: 4
Max nTPM: 154.3
Min nTPM: 116.4
RHH5201_R3572
116.4
RHH5229_R3601
154.3
RHH5258_R3630
135.7
RHH5287_R3659
141.1
Non-Vd2 gdTCR nTPM: 17.3
Samples: 4
Max nTPM: 28.4
Min nTPM: 7.6
RHH5235_R3607
28.4
RHH5264_R3636
20.1
RHH5207_R3578
7.6
RHH5299_R3665
13.2
T-reg nTPM: 69.4
Samples: 4
Max nTPM: 101.8
Min nTPM: 43.1
RHH5301_R3667
72.6
RHH5237_R3609
101.8
RHH5266_R3638
43.1
RHH5209_R3580
60.1
Terminal effector memory CD4 T-cell nTPM: 18.3
Samples: 2
Max nTPM: 33.9
Min nTPM: 2.6
RHH5243_R3615
2.6
RHH5272_R3644
33.9
Terminal effector memory CD8 T-cell nTPM: 11.9
Samples: 4
Max nTPM: 18.3
Min nTPM: 4.7
RHH5232_R3604
18.3
RHH5204_R3575
4.7
RHH5261_R3633
9.7
RHH5296_R3662
14.7
Vd2 gdTCR nTPM: 22.5
Samples: 4
Max nTPM: 29.8
Min nTPM: 14.5
RHH5234_R3606
29.8
RHH5206_R3577
14.5
RHH5263_R3635
25.0
RHH5298_R3664
20.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
