HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:115.9 nTPM
HPA Brain:122.8 nTPM
GTEx:115.9 nTPM
FANTOM5:111.1 Scaled Tags Per Million
Pig:224.0 nTPM
Mouse:164.1 nTPM
Allen mouse:8.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 122.8
Sample id Sample description nTPM
Hippocampus
nTPM: 109.5
1898 Male, age 80, left hemisphere 119.1
1855 Male, age 76, left hemisphere 116.8
1911 Female, age 85, right hemisphere 114.3
2621 Female, age 67, right hemisphere 105.6
2148 Female, age 91, left hemisphere 103.5
2529 Female, age 94, left hemisphere 98.0
Dentate gyrus
nTPM: 106.4
2246 Female, age 85, both hemispheres 122.5
2531 Female, age 67, both hemispheres 114.1
1927 Female, age 91, both hemispheres 107.3
2010 Male, age 76, both hemispheres 103.5
2528 Male, age 74, both hemispheres 96.5
2530 Female, age 94, left hemisphere 94.6
Entorhinal gyrus
nTPM: 101.7
2764 Male, age 80, right hemisphere 112.8
1938 Female, age 85, left hemisphere 104.8
2117 Female, age 91, right hemisphere 101.6
2686 Male, age 75, right hemisphere 97.4
2613 Female, age 94, left hemisphere 96.9
1787 Male, age 76, left hemisphere 96.4
Hippocampus, CA1
nTPM: 122.8
2749 Male, age 80, left hemisphere 150.6
2045 Male, age 76, both hemispheres 129.1
2082 Female, age 91, right hemisphere 114.0
1873 Female, age 85, both hemispheres 112.7
2527 Male, age 74, both hemispheres 107.5
Hippocampus, CA2
nTPM: 101.9
2113 Female, age 91, right hemisphere 113.2
1892 Male, age 76, both hemispheres 108.2
1963 Male, age 80, left hemisphere 106.5
1940 Female, age 85, left hemisphere 105.0
2249 Male, age 74, both hemispheres 92.1
2437 Female, age 94, left hemisphere 86.6
Hippocampus, CA3
nTPM: 118.4
2137 Male, age 80, left hemisphere 156.7
2620 Female, age 94, left hemisphere 156.0
1891 Female, age 85, both hemispheres 107.3
1867 Male, age 76, both hemispheres 102.4
2861 Female, age 67, both hemispheres 102.3
2436 Male, age 74, both hemispheres 86.0
Parahippocampal cortex
nTPM: 110.3
2245 Female, age 91, both hemispheres 148.0
2693 Female, age 94, both hemispheres 124.1
1850 Male, age 80, both hemispheres 118.6
1933 Female, age 85, both hemispheres 117.3
2018 Male, age 76, both hemispheres 113.1
2532 Female, age 72, left hemisphere 112.0
2622 Female, age 67, right hemisphere 99.1
2250 Female, age 67, right hemisphere 95.4
1990 Female, age 91, right hemisphere 90.6
2692 Male, age 74, both hemispheres 85.1
Perirhinal gyrus
nTPM: 121.7
1794 Male, age 80, right hemisphere 127.4
2521 Female, age 94, right hemisphere 126.5
2848 Male, age 76, right hemisphere 121.8
1847 Female, age 91, left hemisphere 118.5
1841 Female, age 85, right hemisphere 114.5
Subiculum
nTPM: 103.5
1901 Male, age 80, both hemispheres 126.5
2042 Male, age 76, both hemispheres 115.5
1977 Female, age 85, both hemispheres 113.1
2729 Female, age 91, right hemisphere 95.8
2438 Female, age 94, left hemisphere 88.7
2619 Male, age 74, both hemispheres 81.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 115.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 115.9
Samples: 197

Max nTPM: 262.4
Min nTPM: 60.2
Std nTPM: 23.9
Median nTPM: 114.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 262.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 188.6
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 180.5
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 163.3
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 162.4
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 159.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 158.1
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 156.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 155.9
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 155.3
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 155.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 111.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 111.1
FF:10169-103B7 60 years, female 127.7
FF:10153-102I9 76 years, female 94.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 224.0
Pig sample Sample description nTPM
Subiculum
nTPM: 217.2
Samples: 4

Max nTPM: 271.0
Min nTPM: 195.2
Sample A Female 271.0
Sample B Female 200.0
Sample C Male 195.2
Sample D Male 202.4
Dorsal hippocampus
nTPM: 224.0
Samples: 4

Max nTPM: 272.5
Min nTPM: 187.8
Sample A Female 272.5
Sample B Female 232.6
Sample C Male 187.8
Sample D Male 203.0
Entorhinal cortex
nTPM: 203.9
Samples: 4

Max nTPM: 215.2
Min nTPM: 195.2
Sample A Female 215.2
Sample B Female 196.9
Sample C Male 208.2
Sample D Male 195.2
Ventral hippocampus
nTPM: 204.8
Samples: 4

Max nTPM: 249.3
Min nTPM: 171.7
Sample A Female 206.2
Sample B Female 171.7
Sample C Male 191.9
Sample D Male 249.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 164.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 135.8
Samples: 4

Max nTPM: 156.2
Min nTPM: 121.7
Sample A Male 129.4
Sample B Male 121.7
Sample C Female 156.2
Sample D Female 135.8
Hippocampal formation
nTPM: 164.1
Samples: 4

Max nTPM: 181.5
Min nTPM: 154.4
Sample A Male 181.5
Sample B Male 154.4
Sample C Female 163.5
Sample D Female 157.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.3
69838238 Antisense, RP_050224_02_D08, Mouse strain C57BL/6J (56 days, male) 8.3

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